Package: BiocOncoTK
Title: Bioconductor components for general cancer genomics
Description: Provide a central interface to various tools for
	genome-scale analysis of cancer studies.  
Version: 1.24.0
Author: Vince Carey
Suggests: knitr, dbplyr, org.Hs.eg.db, MultiAssayExperiment, BiocStyle,
        ontoProc, ontologyPlot, pogos, GenomeInfoDb, restfulSE (>=
        1.3.7), BiocFileCache, TxDb.Hsapiens.UCSC.hg19.knownGene,
        Biobase, TxDb.Hsapiens.UCSC.hg18.knownGene, reshape2, testthat,
        AnnotationDbi, FDb.InfiniumMethylation.hg19,
        EnsDb.Hsapiens.v75, rmarkdown, rhdf5client, AnnotationHub
Imports: ComplexHeatmap, S4Vectors, bigrquery, shiny, stats, httr,
        rjson, dplyr, magrittr, grid, DT, GenomicRanges, IRanges,
        ggplot2, SummarizedExperiment, DBI, GenomicFeatures,
        curatedTCGAData, scales, ggpubr, plyr, car, graph, Rgraphviz,
        MASS, grDevices
Depends: R (>= 3.6.0), methods, utils
Maintainer: VJ Carey <stvjc@channing.harvard.edu>
License: Artistic-2.0
LazyLoad: yes
LazyData: yes
LazyDataCompression: xz
biocViews: CopyNumberVariation, CpGIsland, DNAMethylation,
        GeneExpression, GeneticVariability, SNP, Transcription,
        ImmunoOncology
VignetteBuilder: knitr
RoxygenNote: 7.3.1
Encoding: UTF-8
git_url: https://git.bioconductor.org/packages/BiocOncoTK
git_branch: RELEASE_3_19
git_last_commit: 73631bd
git_last_commit_date: 2024-04-30
Repository: Bioconductor 3.19
Date/Publication: 2024-05-01
NeedsCompilation: no
Packaged: 2024-05-01 21:23:06 UTC; biocbuild
Built: R 4.4.0; ; 2024-05-02 12:29:41 UTC; windows
