MGnifyR-package         'MGnifyR' Package.
MgnifyClient            Constructor for creating a MgnifyClient object
                        to allow the access to MGnify database.
databaseUrl             MgnifyClient accessors and mutators
deprecate               These functions will be deprecated. Please use
                        other functions instead.
doQuery                 Search MGnify database for studies, samples,
                        runs, analyses, biomes, assemblies, and
                        genomes.
getData                 Versatile function to retrieve raw results
getFile                 Download any MGnify files, also including
                        processed reads and identified protein
                        sequences
getMetadata             Get all Study, Sample and Analysis metadata for
                        the supplied analyses accessions
getResult               Get microbial and/or functional profiling data
                        for a list of accessions
searchAnalysis          Look up analysis accession IDs for one or more
                        study or sample accessions
