# Generated by roxygen2: do not edit by hand

export(barcode_lost)
export(compute_data_table)
export(compute_explained_variance)
export(compute_metrics)
export(compute_slope)
export(count_mapped_reads)
export(create_edger_obj)
export(create_screenr_object)
export(filter_by_slope)
export(filter_by_variance)
export(find_camera_hit)
export(find_common_hit)
export(find_roast_hit)
export(find_robust_zscore_hit)
export(find_zscore_hit)
export(get_annotation_table)
export(get_count_table)
export(get_data_table)
export(get_groups)
export(get_normalized_count_table)
export(get_replicates)
export(mapped_reads)
export(normalize_data)
export(plot_barcode_hit)
export(plot_barcode_lost)
export(plot_barcode_lost_for_gene)
export(plot_barcode_trend)
export(plot_boxplot)
export(plot_common_hit)
export(plot_explained_variance)
export(plot_mapped_reads)
export(plot_mapped_reads_distribution)
export(plot_mds)
export(plot_trend)
export(plot_zscore_distribution)
export(remove_all_zero_row)
export(set_annotation_table)
export(set_count_table)
export(set_data_table)
export(set_groups)
export(set_normalized_count_table)
export(set_replicates)
exportClasses(screenr_object)
exportMethods(get_annotation_table)
exportMethods(get_count_table)
exportMethods(get_data_table)
exportMethods(get_groups)
exportMethods(get_normalized_count_table)
exportMethods(get_replicates)
exportMethods(set_annotation_table)
exportMethods(set_count_table)
exportMethods(set_data_table)
exportMethods(set_groups)
exportMethods(set_normalized_count_table)
exportMethods(set_replicates)
importFrom(dplyr,as_tibble)
importFrom(dplyr,bind_rows)
importFrom(dplyr,filter)
importFrom(dplyr,group_by)
importFrom(dplyr,if_all)
importFrom(dplyr,if_else)
importFrom(dplyr,left_join)
importFrom(dplyr,mutate)
importFrom(dplyr,n)
importFrom(dplyr,pull)
importFrom(dplyr,rename)
importFrom(dplyr,select)
importFrom(dplyr,select_if)
importFrom(dplyr,summarise)
importFrom(dplyr,sym)
importFrom(dplyr,ungroup)
importFrom(dplyr,vars)
importFrom(edgeR,DGEList)
importFrom(edgeR,estimateDisp)
importFrom(edgeR,glmFit)
importFrom(edgeR,glmLRT)
importFrom(edgeR,topTags)
importFrom(ggplot2,aes)
importFrom(ggplot2,facet_wrap)
importFrom(ggplot2,geom_bar)
importFrom(ggplot2,geom_boxplot)
importFrom(ggplot2,geom_density)
importFrom(ggplot2,geom_label)
importFrom(ggplot2,geom_line)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_smooth)
importFrom(ggplot2,geom_text)
importFrom(ggplot2,geom_violin)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,ggtitle)
importFrom(ggplot2,labs)
importFrom(ggplot2,position_stack)
importFrom(ggplot2,scale_color_manual)
importFrom(ggplot2,scale_fill_manual)
importFrom(ggplot2,scale_x_continuous)
importFrom(ggplot2,scale_y_continuous)
importFrom(ggplot2,theme)
importFrom(limma,barcodeplot)
importFrom(limma,camera)
importFrom(limma,mroast)
importFrom(limma,plotMDS)
importFrom(magrittr,"%>%")
importFrom(methods,"slot<-")
importFrom(methods,new)
importFrom(methods,slot)
importFrom(patchwork,wrap_plots)
importFrom(purrr,map)
importFrom(purrr,map_if)
importFrom(purrr,map_lgl)
importFrom(purrr,reduce)
importFrom(rlang,.data)
importFrom(scales,percent)
importFrom(stats,lm)
importFrom(stats,median)
importFrom(stats,prcomp)
importFrom(stats,sd)
importFrom(stringr,str_split_fixed)
importFrom(tibble,rownames_to_column)
importFrom(tibble,tibble)
importFrom(tidyr,drop_na)
importFrom(tidyr,gather)
importFrom(tidyr,pivot_longer)
importFrom(tidyr,pivot_wider)
importFrom(tidyr,spread)
importFrom(tidyselect,all_of)
importFrom(tidyselect,vars_select_helpers)
