Package: celaref
Title: Single-cell RNAseq cell cluster labelling by reference
Version: 1.22.0
Authors@R: person("Sarah", "Williams", email = "sarah.williams1@monash.edu", role = c("aut", "cre"))
Description: After the clustering step of a single-cell RNAseq experiment, this
   package aims to suggest labels/cell types for the clusters, on the basis of 
   similarity to a reference dataset. It requires a table of read counts per 
   cell per gene, and a list of the cells belonging to each of the clusters, 
   (for both test and reference data). 
Depends: R (>= 3.5.0), SummarizedExperiment
Imports: MAST, ggplot2, Matrix, dplyr, magrittr, stats, utils, rlang,
        BiocGenerics, S4Vectors, readr, tibble, DelayedArray
Suggests: limma, parallel, knitr, rmarkdown, ExperimentHub, testthat
biocViews: SingleCell
VignetteBuilder: knitr
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.1.1
git_url: https://git.bioconductor.org/packages/celaref
git_branch: RELEASE_3_19
git_last_commit: 0f17788
git_last_commit_date: 2024-04-30
Repository: Bioconductor 3.19
Date/Publication: 2024-05-01
NeedsCompilation: no
Packaged: 2024-05-01 21:40:42 UTC; biocbuild
Author: Sarah Williams [aut, cre]
Maintainer: Sarah Williams <sarah.williams1@monash.edu>
Built: R 4.4.0; ; 2024-05-02 12:33:44 UTC; windows
