Package: compEpiTools
Type: Package
Title: Tools for computational epigenomics
Version: 1.38.0
Date: 2023-05-02
Authors@R: c(person("Mattia", "Pelizzola", role = "aut"), person("Kamal", "Kishore", role = "aut"), person("Mattia", "Furlan", email = "mattia.furlan@iit.it", role = c("ctb","cre")))
Description: Tools for computational epigenomics developed for the analysis, integration and simultaneous visualization of various (epi)genomics data types across multiple genomic regions in multiple samples.
License: GPL
Imports: AnnotationDbi, BiocGenerics, Biostrings, Rsamtools, parallel,
        grDevices, gplots, IRanges, GenomicFeatures, XVector,
        methylPipe, GO.db, S4Vectors, GenomeInfoDb
Depends: R (>= 3.5.0), methods, topGO, GenomicRanges
Suggests: BSgenome.Mmusculus.UCSC.mm9,
        TxDb.Mmusculus.UCSC.mm9.knownGene, org.Mm.eg.db, knitr,
        rtracklayer
VignetteBuilder: knitr
biocViews: GeneExpression, Sequencing, Visualization, GenomeAnnotation,
        Coverage
git_url: https://git.bioconductor.org/packages/compEpiTools
git_branch: RELEASE_3_19
git_last_commit: b4f7b92
git_last_commit_date: 2024-04-30
Repository: Bioconductor 3.19
Date/Publication: 2024-05-01
NeedsCompilation: no
Packaged: 2024-05-01 21:58:36 UTC; biocbuild
Author: Mattia Pelizzola [aut],
  Kamal Kishore [aut],
  Mattia Furlan [ctb, cre]
Maintainer: Mattia Furlan <mattia.furlan@iit.it>
Built: R 4.4.0; ; 2024-05-02 12:38:02 UTC; windows
