Type: Package
Package: findIPs
Title: Influential Points Detection for Feature Rankings
Version: 1.0.0
Date: 2024-04-03
Authors@R: c(
    person("Shuo", "Wang", , "wangsures@foxmail.com", role = c("aut", "cre"),
           comment = c(ORCID = "0009-0000-0424-2160")),
    person("Junyan", "Lu", , "junyan.lu@uni-heidelberg.de", role = "aut")
  )
Description: Feature rankings can be distorted by a single case in the
    context of high-dimensional data. The cases exerts abnormal influence
    on feature rankings are called influential points (IPs). The package
    aims at detecting IPs based on case deletion and quantifies their
    effects by measuring the rank changes (DOI:10.48550/arXiv.2303.10516).
    The package applies a novel rank comparing measure using the adaptive
    weights that stress the top-ranked important features and adjust the
    weights to ranking properties.
License: GPL-3
URL: https://github.com/ShuoStat/findIPs
BugReports: https://github.com/ShuoStat/findIPs
Depends: graphics, R (>= 4.4.0)
Imports: Biobase, BiocParallel, parallel, stats, SummarizedExperiment,
        survival, utils
Suggests: BiocStyle, knitr, rmarkdown, testthat
VignetteBuilder: knitr
biocViews: GeneExpression, DifferentialExpression, Regression, Survival
Encoding: UTF-8
LazyData: FALSE
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.1
git_url: https://git.bioconductor.org/packages/findIPs
git_branch: RELEASE_3_19
git_last_commit: d68f0c6
git_last_commit_date: 2024-04-30
Repository: Bioconductor 3.19
Date/Publication: 2024-05-01
NeedsCompilation: no
Packaged: 2024-05-01 23:00:25 UTC; biocbuild
Author: Shuo Wang [aut, cre] (<https://orcid.org/0009-0000-0424-2160>),
  Junyan Lu [aut]
Maintainer: Shuo Wang <wangsures@foxmail.com>
Built: R 4.4.0; ; 2024-05-02 12:49:06 UTC; windows
