Package: scFeatures
Title: scFeatures: Multi-view representations of single-cell and
        spatial data for disease outcome prediction
Version: 1.4.0
Authors@R: 
    c(
    person(given = "Yue",family = "Cao", email = "yue.cao@sydney.edu.au",  role=c("aut", "cre")),
    person(given = "Yingxin",family = "Lin", email = "yingxin.lin@sydney.edu.au",  role="aut" ),
    person(given = "Ellis",family = "Patrick", email = "ellis.patrick@sydney.edu.au",  role="aut" ),
    person(given = "Pengyi",family = "Yang", email = "pengyi.yang@sydney.edu.au",  role="aut" ),
    person(given = "Jean Yee Hwa",family = "Yang", email = "jean.yang@sydney.edu.au",  role="aut" ))
Description: scFeatures constructs multi-view representations of single-cell
             and spatial data. scFeatures is a tool that generates multi-view
             representations of single-cell and spatial data through the
             construction of a total of 17 feature types. These features can 
             then be used for a variety of analyses using other software in
             Biocondutor.
License: GPL-3
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3
biocViews: CellBasedAssays, SingleCell, Spatial, Software,
        Transcriptomics
Depends: R (>= 4.2.0)
Imports: DelayedArray, DelayedMatrixStats, EnsDb.Hsapiens.v79,
        EnsDb.Mmusculus.v79, GSVA, ape, glue, dplyr, ensembldb, gtools,
        msigdbr, proxyC, reshape2, spatstat.explore, spatstat.geom,
        tidyr, AUCell, BiocParallel, rmarkdown, methods, stats, cli,
        SingleCellSignalR, MatrixGenerics, Seurat, DT
Suggests: knitr, S4Vectors, survival, survminer, BiocStyle, ClassifyR,
        org.Hs.eg.db, clusterProfiler
VignetteBuilder: knitr
URL: https://sydneybiox.github.io/scFeatures/
        https://github.com/SydneyBioX/scFeatures/
BugReports: https://github.com/SydneyBioX/scFeatures/issues
git_url: https://git.bioconductor.org/packages/scFeatures
git_branch: RELEASE_3_19
git_last_commit: b3d1905
git_last_commit_date: 2024-04-30
Repository: Bioconductor 3.19
Date/Publication: 2024-05-01
NeedsCompilation: no
Packaged: 2024-05-02 01:45:42 UTC; biocbuild
Author: Yue Cao [aut, cre],
  Yingxin Lin [aut],
  Ellis Patrick [aut],
  Pengyi Yang [aut],
  Jean Yee Hwa Yang [aut]
Maintainer: Yue Cao <yue.cao@sydney.edu.au>
Built: R 4.4.0; ; 2024-05-02 13:29:10 UTC; windows
