Package: splatter
Type: Package
Title: Simple Simulation of Single-cell RNA Sequencing Data
Version: 1.28.0
Date: 2024-04-23
Authors@R: 
    c(person("Luke", "Zappia", role = c("aut", "cre"),
      email = "luke@lazappi.id.au",
      comment = c(ORCID = "0000-0001-7744-8565", GitHub = "lazappi")),
      person("Belinda", "Phipson", role = c("aut"),
      email = "belinda.phipson@petermac.org",
      comment = c(ORCID = "0000-0002-1711-7454", GitHub = "bphipson")),
      person("Christina", "Azodi", role = c("ctb"),
      email = "cazodi@svi.edu.au",
      comment = c(ORCID = "0000-0002-6097-606X", GitHub = "azodichr")),
      person("Alicia", "Oshlack", role = c("aut"),
      email = "alicia.oshlack@petermac.org",
      comment = c(ORCID = "0000-0001-9788-5690")))
Description: Splatter is a package for the simulation of single-cell RNA
    sequencing count data. It provides a simple interface for creating complex
    simulations that are reproducible and well-documented. Parameters can be
    estimated from real data and functions are provided for comparing real and
    simulated datasets.
License: GPL-3 + file LICENSE
Depends: R (>= 4.0), SingleCellExperiment
Imports: BiocGenerics, BiocParallel, checkmate (>= 2.0.0), crayon,
        edgeR, fitdistrplus, grDevices, locfit, matrixStats, methods,
        rlang, S4Vectors, scuttle, stats, SummarizedExperiment, utils,
        withr
Suggests: BASiCS (>= 1.7.10), BiocManager, BiocSingular, BiocStyle,
        Biostrings, covr, cowplot, GenomeInfoDb, GenomicRanges, ggplot2
        (>= 3.4.0), IRanges, igraph, knitr, limSolve, lme4, magick,
        mfa, phenopath, progress, preprocessCore, pscl, rmarkdown,
        scales, scater (>= 1.15.16), scDD, scran, SparseDC, spelling,
        testthat, VariantAnnotation, zinbwave,
biocViews: SingleCell, RNASeq, Transcriptomics, GeneExpression,
        Sequencing, Software, ImmunoOncology
URL: https://bioconductor.org/packages/splatter/,
        https://github.com/Oshlack/splatter
BugReports: https://github.com/Oshlack/splatter/issues
RoxygenNote: 7.3.1
Encoding: UTF-8
VignetteBuilder: knitr
Language: en-GB
git_url: https://git.bioconductor.org/packages/splatter
git_branch: RELEASE_3_19
git_last_commit: 5e5b43e
git_last_commit_date: 2024-04-30
Repository: Bioconductor 3.19
Date/Publication: 2024-05-01
NeedsCompilation: no
Packaged: 2024-05-02 02:11:03 UTC; biocbuild
Author: Luke Zappia [aut, cre] (<https://orcid.org/0000-0001-7744-8565>,
    lazappi),
  Belinda Phipson [aut] (<https://orcid.org/0000-0002-1711-7454>,
    bphipson),
  Christina Azodi [ctb] (<https://orcid.org/0000-0002-6097-606X>,
    azodichr),
  Alicia Oshlack [aut] (<https://orcid.org/0000-0001-9788-5690>)
Maintainer: Luke Zappia <luke@lazappi.id.au>
Built: R 4.4.0; ; 2024-05-02 13:35:31 UTC; windows
