# Tools for making TxDb objects from genomic annotations

## Documentation for package ‘txdbmaker’ version 1.0.1

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

txdbmaker-package | Tools for making TxDb objects from genomic annotations
browseUCSCtrack | Make a TxDb object from annotations available at the UCSC Genome Browser
getChromInfoFromBiomart | Make a TxDb object from annotations available on a BioMart database
makeFDbPackageFromUCSC | Making a TxDb package from annotations available at the UCSC Genome Browser, biomaRt or from another source.
makeFeatureDbFromUCSC | Making a FeatureDb object from annotations available at the UCSC Genome Browser
makePackageName | Making a TxDb package from annotations available at the UCSC Genome Browser, biomaRt or from another source.
makeTxDb | Making a TxDb object from user supplied annotations
makeTxDbFromBiomart | Make a TxDb object from annotations available on a BioMart database
makeTxDbFromEnsembl | Make a TxDb object from an Ensembl database
makeTxDbFromGFF | Make a TxDb object from annotations available as a GFF3 or GTF file
makeTxDbFromGRanges | Make a TxDb object from a GRanges object
makeTxDbFromUCSC | Make a TxDb object from annotations available at the UCSC Genome Browser
makeTxDbPackage | Making a TxDb package from annotations available at the UCSC Genome Browser, biomaRt or from another source.
makeTxDbPackageFromBiomart | Making a TxDb package from annotations available at the UCSC Genome Browser, biomaRt or from another source.
makeTxDbPackageFromUCSC | Making a TxDb package from annotations available at the UCSC Genome Browser, biomaRt or from another source.
supportedMiRBaseBuildValues | Making a TxDb package from annotations available at the UCSC Genome Browser, biomaRt or from another source.
supportedUCSCFeatureDbTables | Making a FeatureDb object from annotations available at the UCSC Genome Browser
supportedUCSCFeatureDbTracks | Making a FeatureDb object from annotations available at the UCSC Genome Browser
supportedUCSCtables | Make a TxDb object from annotations available at the UCSC Genome Browser
txdbmaker | Tools for making TxDb objects from genomic annotations
UCSCFeatureDbTableSchema | Making a FeatureDb object from annotations available at the UCSC Genome Browser