Package: uSORT
Title: uSORT: A self-refining ordering pipeline for gene selection
Version: 1.30.0
Author: Mai Chan Lau, Hao Chen, Jinmiao Chen
Description: This package is designed to uncover the intrinsic cell
        progression path from single-cell RNA-seq data. It incorporates
        data pre-processing, preliminary PCA gene selection,
        preliminary cell ordering, feature selection, refined cell
        ordering, and post-analysis interpretation and visualization.
Maintainer: Hao Chen <chen_hao@immunol.a-star.edu.sg>
biocViews: ImmunoOncology, RNASeq, GUI, CellBiology, DNASeq
Depends: R (>= 3.3.0), tcltk
VignetteBuilder: knitr
Suggests: knitr, RUnit, testthat, ggplot2
Imports: igraph, Matrix, RANN, RSpectra, VGAM, gplots, parallel, plyr,
        methods, cluster, Biobase, fpc, BiocGenerics, monocle,
        grDevices, graphics, stats, utils
License: Artistic-2.0
Encoding: UTF-8
RoxygenNote: 5.0.1
git_url: https://git.bioconductor.org/packages/uSORT
git_branch: RELEASE_3_19
git_last_commit: 9688ccc
git_last_commit_date: 2024-04-30
Repository: Bioconductor 3.19
Date/Publication: 2024-05-01
NeedsCompilation: no
Packaged: 2024-05-02 02:30:20 UTC; biocbuild
Built: R 4.4.0; ; 2024-05-02 13:41:24 UTC; windows
