Package: zellkonverter
Title: Conversion Between scRNA-seq Objects
Version: 1.14.1
Date: 2024-06-21
Authors@R: 
    c(person(given = "Luke",
             family = "Zappia",
             role = c("aut", "cre"),
             email = "luke@lazappi.id.au",
             comment = c(ORCID = "0000-0001-7744-8565")),
      person(given = "Aaron",
             family = "Lun",
             role = c("aut"),
             email = "infinite.monkeys.with.keyboards@gmail.com",
             comment = c(ORCID = "0000-0002-3564-4813")),
      person(given = "Jack",
             family = "Kamm",
             role = c("ctb"),
             email = "jackkamm@gmail.com",
             comment = c(ORCID = "0000-0003-2412-756X")),
      person(given = "Robrecht",
             family = "Cannoodt",
             role = c("ctb"),
             email = "rcannood@gmail.com",
             comment = c(ORCID = "0000-0003-3641-729X", github = "rcannood"))
    )
Description: 
    Provides methods to convert between Python AnnData objects and
    SingleCellExperiment objects. These are primarily intended for use by
    downstream Bioconductor packages that wrap Python methods for single-cell
    data analysis. It also includes functions to read and write H5AD files used
    for saving AnnData objects to disk. 
biocViews: SingleCell, DataImport, DataRepresentation
License: MIT + file LICENSE
Imports: Matrix, basilisk, reticulate, SingleCellExperiment (>=
        1.11.6), SummarizedExperiment, DelayedArray, methods,
        S4Vectors, utils, cli
Suggests: anndata, BiocFileCache, BiocStyle, covr, HDF5Array, knitr,
        pkgload, rmarkdown, rhdf5 (>= 2.45.1), scRNAseq, spelling,
        testthat, withr
Collate: 'AnnData2SCE.R' 'SCE2AnnData.R' 'ui.R' 'basilisk.R' 'read.R'
        'reticulate.R' 'utils.R' 'validation.R' 'write.R'
        'zellkonverter-package.R'
URL: https://github.com/theislab/zellkonverter
BugReports: https://github.com/theislab/zellkonverter/issues
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.1
Language: en-GB
StagedInstall: no
VignetteBuilder: knitr
git_url: https://git.bioconductor.org/packages/zellkonverter
git_branch: RELEASE_3_19
git_last_commit: c90c58a
git_last_commit_date: 2024-06-21
Repository: Bioconductor 3.19
Date/Publication: 2024-06-26
NeedsCompilation: no
Packaged: 2024-06-27 02:46:27 UTC; biocbuild
Author: Luke Zappia [aut, cre] (<https://orcid.org/0000-0001-7744-8565>),
  Aaron Lun [aut] (<https://orcid.org/0000-0002-3564-4813>),
  Jack Kamm [ctb] (<https://orcid.org/0000-0003-2412-756X>),
  Robrecht Cannoodt [ctb] (<https://orcid.org/0000-0003-3641-729X>,
    rcannood)
Maintainer: Luke Zappia <luke@lazappi.id.au>
Built: R 4.4.0; ; 2024-06-27 13:07:04 UTC; windows
