# Explores Cancer Testis Genes

## Documentation for package ‘CTexploreR’ version 1.2.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

all_genes | All genes description table
CCLE_expression | Gene expression in CCLE Tumors
check_names | Check spelling of entered variables
CT_correlated_genes | Gene correlations in CCLE cancer cell lines
CT_genes | CT genes description table
DAC_induction | Gene expression in cells treated or not by a demethylating agent
embryos_mean_methylation | Promoter methylation of any gene in early embryos
embryo_expression | Gene expression in human embryos
fetal_germcells_expression | Gene expression in fetal germ cells
fetal_germcells_mean_methylation | Promoter methylation of any gene in fetal germ cells
GTEX_expression | Gene expression in normal tissues (GTEx)
hESC_expression | Gene expression in human embryonic stem cells
hESC_mean_methylation | Promoter methylation of any gene in hESC
HPA_cell_type_expression | Gene expression in different human cell types
normal_tissues_mean_methylation | Promoter methylation of any gene in normal tissues
normal_tissues_methylation | Methylation of CpGs located in promoters in normal tissues
normal_tissue_expression_multimapping | Expression values (TPM) of genes in normal tissues with or without multimapping
oocytes_expression | Gene expression in oocytes
prepare_TCGA_methylation_expression | Prepare methylation and expression data of a gene in TCGA tumors
set_fontsize | Determine font size
subset_database | Subset databases
TCGA_expression | Gene expression in TCGA tumors
TCGA_methylation_expression_correlation | Methylation-Expression correlation of any genes in TCGA samples
testis_expression | Gene expression in testis cells