# Network Seriation And Modularization

## Documentation for package ‘NetSAM’ version 1.46.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

NetSAM-package | Network Seriation and Modularization
consensusNet | Construction of a consensus coexpression network
featureAssociation | Calculate the associations between modules and sample features
GOAssociation | Identify the associated GO terms for each module
mapToSymbol | Map other ids to gene symbols
MatNet | Construction of correlation network from a matrix
MatSAM | Correlation network construction, seriation and modularization from a matrix
mergeDuplicate | Merge the duplicate Ids in the matrix data
NetAnalyzer | Network analyzer
NetSAM | Network Seriation and Modularization
netsam_output | An example of the list object returned by NetSAM function
testFileFormat | Test whether the data matrix and the annotation have a correct format