Package: RiboCrypt
Type: Package
Title: Interactive visualization in genomics
Version: 1.12.0
Authors@R: c(
  person(given = "Michal", family = "Swirski", email = "michal.swirski@uw.edu.pl", role = c("aut", "cre", "cph")),
  person(given = "Haakon", family = "Tjeldnes", email = "hauken_heyken@hotmail.com", role = c("aut","ctb")),
  person(given = "Kornel", family = "Labun", email = "kornellabun@gmail.com", role = c("ctb")))
License: MIT + file LICENSE
Description: R Package for interactive visualization and browsing NGS data. 
  It contains a browser for both transcript and genomic coordinate view. 
  In addition a QC and general metaplots are included, among others differential translation plots 
  and gene expression plots. The package is still under development. 
biocViews: Software, Sequencing, RiboSeq, RNASeq,
Encoding: UTF-8
BugReports: https://github.com/m-swirski/RiboCrypt/issues
URL: https://github.com/m-swirski/RiboCrypt
Depends: R (>= 3.6.0), ORFik (>= 1.13.12)
Imports: bslib, BiocGenerics, BiocParallel, Biostrings, data.table,
        dplyr, GenomeInfoDb, GenomicFeatures, GenomicRanges, ggplot2,
        htmlwidgets, httr, IRanges, jsonlite, knitr, markdown,
        NGLVieweR, plotly, rlang, RCurl, shiny, shinycssloaders,
        shinyhelper, shinyjqui, stringr
Suggests: testthat, rmarkdown, BiocStyle, BSgenome,
        BSgenome.Hsapiens.UCSC.hg19
RoxygenNote: 7.2.3
VignetteBuilder: knitr
git_url: https://git.bioconductor.org/packages/RiboCrypt
git_branch: RELEASE_3_20
git_last_commit: 58dbf65
git_last_commit_date: 2024-10-29
Repository: Bioconductor 3.20
Date/Publication: 2024-10-29
NeedsCompilation: no
Packaged: 2024-10-30 05:12:43 UTC; biocbuild
Author: Michal Swirski [aut, cre, cph],
  Haakon Tjeldnes [aut, ctb],
  Kornel Labun [ctb]
Maintainer: Michal Swirski <michal.swirski@uw.edu.pl>
Built: R 4.4.1; ; 2024-10-30 16:37:13 UTC; windows
