Package: brainflowprobes
Type: Package
Title: Plots and annotation for choosing BrainFlow target probe
        sequence
Version: 1.20.0
Date: 2021-08-05
Authors@R: c(person("Amanda", "Price", email = "amanda.joy.price@gmail.com", 
  role = c("aut", "cre"), comment = c(ORCID = "0000-0001-7352-3732")),
  person("Leonardo", "Collado-Torres", role = c("ctb"), 
  email = "lcolladotor@gmail.com", comment = c(ORCID = "0000-0003-2140-308X")))
Description: Use these functions to characterize genomic regions for
  BrainFlow target probe design.
License: Artistic-2.0
Encoding: UTF-8
LazyData: true
Depends: R (>= 3.6.0)
Imports: Biostrings (>= 2.52.0), BSgenome.Hsapiens.UCSC.hg19 (>=
        1.4.0), bumphunter (>= 1.26.0), cowplot (>= 1.0.0), derfinder
        (>= 1.18.1), derfinderPlot (>= 1.18.1), GenomicRanges (>=
        1.36.0), ggplot2 (>= 3.1.1), RColorBrewer (>= 1.1), utils,
        grDevices, GenomicState (>= 0.99.7)
RoxygenNote: 7.2.3
Suggests: BiocStyle, knitr, RefManageR, rmarkdown, sessioninfo,
        testthat (>= 2.1.0), covr
VignetteBuilder: knitr
URL: https://github.com/LieberInstitute/brainflowprobes
BugReports: https://support.bioconductor.org/t/brainflowprobes
biocViews: Coverage, Visualization, ExperimentalDesign,
        Transcriptomics, FlowCytometry, GeneTarget
Roxygen: list(markdown = TRUE)
PackageStatus: Deprecated
git_url: https://git.bioconductor.org/packages/brainflowprobes
git_branch: RELEASE_3_20
git_last_commit: 9dae052
git_last_commit_date: 2024-10-29
Repository: Bioconductor 3.20
Date/Publication: 2024-10-29
NeedsCompilation: no
Packaged: 2024-10-30 01:29:32 UTC; biocbuild
Author: Amanda Price [aut, cre] (<https://orcid.org/0000-0001-7352-3732>),
  Leonardo Collado-Torres [ctb] (<https://orcid.org/0000-0003-2140-308X>)
Maintainer: Amanda Price <amanda.joy.price@gmail.com>
Built: R 4.4.1; ; 2024-10-30 15:31:57 UTC; windows
