# Generated by roxygen2: do not edit by hand

#S3method(createNetwork,XCMSnExp)
#S3method(createNetwork,xcmsSet)
#S3method(createanClique,XCMSnExp)
#S3method(createanClique,xcmsSet)
#S3method(summary,anClique)
#export(anClique)
export(computeCliques)
export(createNetwork)
export(createanClique)
export(getAnnotation)
export(getCliques)
export(getIsotopes)
importFrom(Rcpp, evalCpp)
importFrom("methods", "as")
importFrom("methods", "is")
importClassesFrom("xcms", "xcmsSet", "XCMSnExp")
import("MSnbase")

# new S4 methods
export(getlistofCliques)
export(getIsolistanClique)
export(getNetanClique)
export("getNetanClique<-")
export(getPeaklistanClique)
export("getPeaklistanClique<-")
#exportClasses(anClique)

export(hasAnnotation)
export("hasAnnotation<-")
export(hasCliques)
export("hasCliques<-")
export(hasIsotopes)
export("hasIsotopes<-")

exportMethods(createNetwork)
exportMethods(createanClique)
exportMethods(getlistofCliques)
exportMethods("getlistofCliques<-")
exportMethods(getIsolistanClique)
exportMethods(getNetanClique)
exportMethods("getNetanClique<-")
exportMethods(getPeaklistanClique)
exportMethods("getPeaklistanClique<-")

exportMethods(hasAnnotation)
exportMethods("hasAnnotation<-")
exportMethods(hasCliques)
exportMethods("hasCliques<-")
exportMethods(hasIsotopes)
exportMethods("hasIsotopes<-")

exportMethods(show)


useDynLib(cliqueMS, .registration=TRUE)
