Package: h5vc
Type: Package
Title: Managing alignment tallies using a hdf5 backend
Version: 2.40.1
Author: Paul Theodor Pyl
Maintainer: Paul Theodor Pyl <paul.theodor.pyl@gmail.com>
Description: This package contains functions to interact with tally data from NGS experiments that is stored in HDF5 files.
License: GPL (>= 3)
VignetteBuilder: knitr
Depends: grid, gridExtra, ggplot2
LinkingTo: Rhtslib (>= 1.99.1)
Imports: rhdf5, reshape, S4Vectors, IRanges, Biostrings, Rsamtools (>=
        2.13.1), methods, GenomicRanges, abind, BiocParallel,
        BatchJobs, h5vcData, GenomeInfoDb
Suggests: knitr, locfit, BSgenome.Hsapiens.UCSC.hg19, biomaRt,
        BSgenome.Hsapiens.NCBI.GRCh38, RUnit, BiocGenerics, rmarkdown
SystemRequirements: GNU make
git_url: https://git.bioconductor.org/packages/h5vc
git_branch: RELEASE_3_20
git_last_commit: b6eb49b
git_last_commit_date: 2025-01-31
Repository: Bioconductor 3.20
Date/Publication: 2025-02-03
NeedsCompilation: yes
Packaged: 2025-02-04 00:43:08 UTC; biocbuild
Built: R 4.4.2; x86_64-w64-mingw32; 2025-02-04 13:40:36 UTC; windows
Archs: x64
