DiffExp                 Differential Exposure Analysis
ExposureClassify        Classify samples by exposure levels
ExposureClassifyCV      k-fold cross-validation of sample classifcation
                        by exposure levels
ExposureCorrelation     Exposure correlation analysis (given a known
                        sample feature)
ExposureGLM             Exposure Generalized Linear Model
ExposureSurvModel       Exposure Cox model
ExposureSurvival        Exposure survival analysis
FuzzyClustExp           Fuzzy Clustering of exposure data
HClustExp               Hierarchical Clustering of exposure data
SignExp                 SignExp class
SignPlot                signeR plot functions
cosmic_data             COSMIC Mutational Signatures
genCountMatrixFromVcf   count matrix and opportunity matrix generators
setSamples              SignExp class methods
signeR                  signeR
signeR-package          Empirical Bayesian approach to mutational
                        signature discovery
signeRFlow              Launch signeRFlow R Shiny web app
tcga_similarities       TCGA Cosmic similarities
tcga_tumors             TCGA tumors used on TCGA Explorer
