Package: xenLite
Date: 2024-09-19
Title: Simple classes and methods for managing Xenium datasets
Version: 1.0.0
Authors@R: 
    c(person(
        "Vincent", "Carey", role = c("aut", "cre"),
        email = "stvjc@channing.harvard.edu",
        comment = c(ORCID = "0000-0003-4046-0063")
     )
    )
Description: Define a relatively light class for managing Xenium data using
	Bioconductor.  Address use of parquet for coordinates, SpatialExperiment
	for assay and sample data.  Address serialization and use of cloud storage.
License: Artistic-2.0
Encoding: UTF-8
Depends: R (>= 4.1)
Suggests: knitr, testthat, BiocStyle, yesno, terra,
        SpatialFeatureExperiment, SFEData, tiff
Imports: SpatialExperiment, BiocFileCache, Matrix, S4Vectors,
        SummarizedExperiment, methods, utils, EBImage, shiny,
        HDF5Array, arrow, ggplot2, SingleCellExperiment, TENxIO, dplyr,
        graphics, stats
VignetteBuilder: knitr
biocViews: Infrastructure
RoxygenNote: 7.3.2
URL: https://github.com/vjcitn/xenLite
BugReports: https://github.com/vjcitn/xenLite/issues
git_url: https://git.bioconductor.org/packages/xenLite
git_branch: RELEASE_3_20
git_last_commit: f59dc8b
git_last_commit_date: 2024-10-29
Repository: Bioconductor 3.20
Date/Publication: 2024-11-05
NeedsCompilation: no
Packaged: 2024-11-06 03:15:06 UTC; biocbuild
Author: Vincent Carey [aut, cre] (<https://orcid.org/0000-0003-4046-0063>)
Maintainer: Vincent Carey <stvjc@channing.harvard.edu>
Built: R 4.4.1; ; 2024-11-06 13:44:39 UTC; windows
