Index of /packages/3.20/bioc/src/contrib
Name Last modified Size
Parent Directory -
Archive/ 2025-04-11 16:39 -
SwathXtend_2.28.0.tar.gz 2024-10-30 18:11 346M
erma_1.22.0.tar.gz 2024-10-30 16:00 198M
easyRNASeq_2.42.0.tar.gz 2024-10-30 16:00 70M
TCGAbiolinks_2.34.1.tar.gz 2025-03-10 16:20 64M
SplicingGraphs_1.46.0.tar.gz 2024-10-30 18:11 46M
BaalChIP_1.32.0.tar.gz 2024-10-30 16:00 45M
ELMER_2.30.0.tar.gz 2024-10-30 16:00 42M
BioTIP_1.20.0.tar.gz 2024-10-30 16:00 41M
ldblock_1.36.0.tar.gz 2024-10-30 16:00 40M
sangeranalyseR_1.16.0.tar.gz 2024-10-30 16:00 38M
cghMCR_1.64.0.tar.gz 2024-10-30 16:00 36M
gwascat_2.38.0.tar.gz 2024-10-30 16:00 34M
BiocSklearn_1.28.0.tar.gz 2024-10-30 16:00 33M
canceR_1.40.0.tar.gz 2024-10-30 16:00 31M
spatialHeatmap_2.12.1.tar.gz 2024-11-28 17:20 31M
gmapR_1.48.0.tar.gz 2024-10-30 16:00 29M
BubbleTree_2.36.0.tar.gz 2024-10-30 16:00 28M
FitHiC_1.32.0.tar.gz 2024-10-30 16:00 28M
oligo_1.70.1.tar.gz 2025-03-10 16:20 27M
banocc_1.30.0.tar.gz 2024-10-30 16:00 26M
iSEE_2.18.0.tar.gz 2024-10-30 16:00 25M
ChIPpeakAnno_3.40.0.tar.gz 2024-10-30 16:00 21M
ggcyto_1.34.0.tar.gz 2024-10-30 16:00 21M
scRepertoire_2.2.1.tar.gz 2024-11-06 17:15 21M
cytomapper_1.18.0.tar.gz 2024-10-30 16:00 21M
iClusterPlus_1.42.0.tar.gz 2024-10-30 16:00 21M
vtpnet_0.46.0.tar.gz 2024-10-30 18:11 20M
ENmix_1.42.2.tar.gz 2025-03-20 16:20 20M
CoGAPS_3.26.0.tar.gz 2024-10-30 16:00 20M
MAGeCKFlute_2.9.0.tar.gz 2024-10-22 18:11 20M
DEGreport_1.42.0.tar.gz 2024-10-30 16:00 20M
sesame_1.24.0.tar.gz 2024-10-30 18:11 19M
SIAMCAT_2.10.0.tar.gz 2024-10-30 18:11 19M
debrowser_1.34.0.tar.gz 2024-10-30 16:00 18M
slalom_1.28.0.tar.gz 2024-10-30 18:11 18M
mixOmics_6.30.0.tar.gz 2024-10-30 16:00 18M
DECIPHER_3.2.0.tar.gz 2024-10-30 16:00 17M
GeomxTools_3.10.0.tar.gz 2024-10-31 16:00 16M
MoleculeExperiment_1.6.0.tar.gz 2024-10-30 16:00 16M
ivygapSE_1.28.0.tar.gz 2024-10-30 16:00 15M
msgbsR_1.30.0.tar.gz 2024-10-30 16:00 15M
MoonlightR_1.32.0.tar.gz 2024-10-30 16:00 15M
EGAD_1.34.0.tar.gz 2024-10-30 16:00 15M
ATACseqQC_1.30.0.tar.gz 2024-10-30 16:00 15M
spiky_1.12.0.tar.gz 2024-10-30 18:11 14M
ontoProc_2.0.0.tar.gz 2024-10-30 16:00 14M
oposSOM_2.24.0.tar.gz 2024-10-30 16:00 13M
GEOquery_2.74.0.tar.gz 2024-10-30 16:00 13M
Rsubread_2.20.0.tar.gz 2024-10-30 16:00 13M
arrayQuality_1.84.0.tar.gz 2024-10-30 16:00 13M
RcisTarget_1.26.0.tar.gz 2024-10-30 16:00 13M
scPipe_2.6.0.tar.gz 2024-10-30 16:00 13M
CINdex_1.34.0.tar.gz 2024-10-30 16:00 13M
knowYourCG_1.2.5.tar.gz 2025-01-02 17:20 12M
M3Drop_1.32.0.tar.gz 2024-10-30 16:00 12M
Biostrings_2.74.1.tar.gz 2024-12-19 17:20 12M
clusterExperiment_2.26.0.tar.gz 2024-10-30 16:00 12M
maftools_2.22.0.tar.gz 2024-10-30 16:00 12M
lpsymphony_1.34.0.tar.gz 2024-10-30 16:00 12M
transomics2cytoscape_1.16.0.tar.gz 2024-10-30 18:11 12M
geneXtendeR_1.32.0.tar.gz 2024-10-30 16:00 12M
EnrichedHeatmap_1.36.0.tar.gz 2024-10-30 16:00 12M
Rhdf5lib_1.28.0.tar.gz 2024-10-30 16:00 12M
msPurity_1.32.0.tar.gz 2024-10-30 16:00 11M
CATALYST_1.30.2.tar.gz 2024-12-05 17:20 11M
GEOexplorer_1.12.0.tar.gz 2024-10-30 16:00 11M
DTA_2.52.0.tar.gz 2024-10-30 16:00 11M
Glimma_2.16.0.tar.gz 2024-10-30 16:00 11M
PCAtools_2.18.0.tar.gz 2024-10-30 16:00 11M
flowStats_4.18.0.tar.gz 2024-10-30 16:00 11M
QuaternaryProd_1.40.0.tar.gz 2024-10-30 16:00 11M
CRISPRseek_1.46.0.tar.gz 2024-10-30 16:00 11M
pcaExplorer_3.0.0.tar.gz 2024-10-30 16:00 11M
rWikiPathways_1.26.0.tar.gz 2024-10-30 16:00 10M
trackViewer_1.42.0.tar.gz 2024-10-30 18:11 10M
pRoloc_1.46.1.tar.gz 2025-02-24 17:20 10M
scTensor_2.16.0.tar.gz 2024-10-30 16:00 10M
RTN_2.30.0.tar.gz 2024-10-30 16:00 10M
progeny_1.28.0.tar.gz 2024-10-30 16:00 10M
STRINGdb_2.18.0.tar.gz 2024-10-30 18:11 10M
ACME_2.62.0.tar.gz 2024-10-30 16:00 9.9M
esATAC_1.28.0.tar.gz 2024-10-30 16:00 9.9M
amplican_1.28.0.tar.gz 2024-10-30 16:00 9.8M
COTAN_2.6.3.tar.gz 2025-03-03 17:20 9.7M
qusage_2.40.0.tar.gz 2024-10-30 16:00 9.6M
EnhancedVolcano_1.24.0.tar.gz 2024-10-30 16:00 9.6M
OCplus_1.80.0.tar.gz 2024-10-30 16:00 9.6M
CNEr_1.42.0.tar.gz 2024-10-30 16:00 9.6M
phantasus_1.26.0.tar.gz 2024-10-30 16:00 9.5M
weitrix_1.18.0.tar.gz 2024-10-30 18:11 9.5M
GeneTonic_3.0.0.tar.gz 2024-10-30 16:00 9.5M
bioCancer_1.34.0.tar.gz 2024-10-30 16:00 9.5M
xcms_4.4.0.tar.gz 2024-10-30 18:11 9.4M
MethPed_1.34.0.tar.gz 2024-10-30 16:00 9.3M
cytoviewer_1.6.0.tar.gz 2024-10-30 16:00 9.3M
GRaNIE_1.10.0.tar.gz 2024-10-30 16:00 9.2M
PRONE_1.0.7.tar.gz 2025-03-27 16:20 9.2M
Statial_1.8.0.tar.gz 2024-10-30 18:11 9.2M
monocle_2.34.0.tar.gz 2024-10-30 16:00 9.0M
SPONGE_1.28.0.tar.gz 2024-10-30 18:11 8.9M
IntramiRExploreR_1.28.0.tar.gz 2024-10-30 16:00 8.9M
acde_1.36.0.tar.gz 2024-10-30 16:00 8.9M
pandaR_1.38.0.tar.gz 2024-10-30 16:00 8.7M
igvR_1.26.0.tar.gz 2024-10-30 16:00 8.6M
methylMnM_1.44.0.tar.gz 2024-10-30 16:00 8.5M
scp_1.16.0.tar.gz 2024-10-30 16:00 8.5M
VaSP_1.18.0.tar.gz 2024-10-30 18:11 8.5M
TPP_3.34.0.tar.gz 2024-10-30 18:11 8.4M
heatmaps_1.30.0.tar.gz 2024-10-30 16:00 8.3M
OncoSimulR_4.8.0.tar.gz 2024-10-30 16:00 8.3M
KnowSeq_1.20.0.tar.gz 2024-10-30 16:00 8.2M
rexposome_1.28.0.tar.gz 2024-10-30 16:00 8.1M
CytoML_2.18.3.tar.gz 2025-03-13 16:20 8.1M
lumi_2.58.0.tar.gz 2024-10-30 16:00 8.0M
affycomp_1.82.0.tar.gz 2024-10-30 16:00 8.0M
ChAMP_2.36.0.tar.gz 2024-10-30 16:00 8.0M
scDataviz_1.16.0.tar.gz 2024-10-30 16:00 7.9M
vidger_1.26.0.tar.gz 2024-10-30 18:11 7.9M
hipathia_3.6.0.tar.gz 2024-10-30 16:00 7.8M
INSPEcT_1.36.0.tar.gz 2024-10-30 16:00 7.8M
snpStats_1.56.0.tar.gz 2024-10-30 18:11 7.7M
HDF5Array_1.34.0.tar.gz 2024-10-30 16:00 7.7M
CRImage_1.54.0.tar.gz 2024-10-30 16:00 7.7M
NanoMethViz_3.2.0.tar.gz 2024-10-30 16:00 7.6M
RnBeads_2.24.0.tar.gz 2024-10-30 16:00 7.6M
flowCut_1.16.0.tar.gz 2024-10-30 16:00 7.6M
alevinQC_1.22.0.tar.gz 2024-10-30 16:00 7.5M
mzR_2.40.0.tar.gz 2024-10-30 16:00 7.5M
GeneRegionScan_1.62.0.tar.gz 2024-10-30 16:00 7.5M
flowCore_2.18.0.tar.gz 2024-10-30 16:00 7.5M
SpaNorm_1.0.0.tar.gz 2024-10-30 18:11 7.5M
PhosR_1.16.0.tar.gz 2024-10-30 16:00 7.4M
SPIAT_1.8.1.tar.gz 2025-03-20 16:20 7.4M
GeneNetworkBuilder_1.48.0.tar.gz 2024-10-30 16:00 7.4M
Rgraphviz_2.50.0.tar.gz 2024-10-30 16:00 7.4M
methylumi_2.52.0.tar.gz 2024-10-30 16:00 7.3M
cogena_1.40.0.tar.gz 2024-10-30 16:00 7.3M
Gviz_1.50.0.tar.gz 2024-10-30 16:00 7.3M
MAST_1.32.0.tar.gz 2024-10-30 16:00 7.3M
recount_1.32.0.tar.gz 2024-10-31 16:00 7.3M
CTexploreR_1.2.0.tar.gz 2024-10-31 16:37 7.3M
shinyMethyl_1.42.0.tar.gz 2024-10-30 18:11 7.2M
ChIPseeker_1.42.1.tar.gz 2025-02-03 17:20 7.2M
rifi_1.10.0.tar.gz 2024-10-30 16:00 7.2M
affyPLM_1.82.0.tar.gz 2024-10-30 16:00 7.2M
geneplast_1.32.0.tar.gz 2024-10-30 16:00 7.1M
miloR_2.2.0.tar.gz 2024-10-30 16:00 7.1M
CTdata_1.6.0.tar.gz 2024-10-30 16:00 7.0M
HPAanalyze_1.24.0.tar.gz 2024-10-30 16:00 6.9M
chromstaR_1.32.0.tar.gz 2024-11-28 17:20 6.8M
flowcatchR_1.40.0.tar.gz 2024-10-30 16:00 6.8M
Rhisat2_1.22.0.tar.gz 2024-10-30 16:00 6.8M
SNPhood_1.36.0.tar.gz 2024-10-30 18:11 6.7M
splatter_1.30.0.tar.gz 2024-10-30 18:11 6.7M
chopsticks_1.72.0.tar.gz 2024-10-30 16:00 6.6M
DeconRNASeq_1.48.0.tar.gz 2024-10-30 16:00 6.6M
iSEEhub_1.8.0.tar.gz 2024-10-30 16:00 6.6M
affycoretools_1.78.0.tar.gz 2024-10-30 16:00 6.6M
systemPipeR_2.12.0.tar.gz 2024-10-30 18:11 6.5M
DiffBind_3.16.0.tar.gz 2024-10-30 16:00 6.5M
RCy3_2.26.0.tar.gz 2024-10-30 16:00 6.5M
IsoformSwitchAnalyzeR_2.6.0.tar.gz 2024-10-30 16:00 6.5M
synergyfinder_3.14.0.tar.gz 2024-10-30 18:11 6.5M
RbcBook1_1.74.0.tar.gz 2024-10-30 16:00 6.4M
DNAfusion_1.8.0.tar.gz 2024-10-30 16:00 6.3M
GenomicSuperSignature_1.14.0.tar.gz 2024-10-30 16:00 6.3M
muscat_1.20.0.tar.gz 2024-11-07 17:15 6.3M
GenomicDistributions_1.14.0.tar.gz 2024-10-30 16:00 6.3M
MSnbase_2.32.0.tar.gz 2024-10-30 16:00 6.2M
traseR_1.36.0.tar.gz 2024-10-30 18:11 6.2M
metaSeq_1.46.0.tar.gz 2024-10-30 16:00 6.2M
MCbiclust_1.30.0.tar.gz 2024-10-30 16:00 6.2M
MetMashR_1.0.0.tar.gz 2024-10-30 16:00 6.2M
psichomics_1.32.0.tar.gz 2024-10-30 16:00 6.1M
phyloseq_1.50.0.tar.gz 2024-10-30 16:00 6.1M
NuPoP_2.14.0.tar.gz 2024-10-30 16:00 6.1M
imcRtools_1.12.0.tar.gz 2024-10-30 16:00 6.1M
DeMixT_1.22.0.tar.gz 2024-10-30 16:00 6.1M
CatsCradle_1.0.1.tar.gz 2025-02-17 17:20 6.0M
genomation_1.38.0.tar.gz 2024-10-30 16:00 6.0M
ggspavis_1.12.0.tar.gz 2024-10-30 16:00 6.0M
NADfinder_1.30.0.tar.gz 2024-10-30 16:00 6.0M
VariantTools_1.48.0.tar.gz 2024-10-30 18:11 6.0M
TFutils_1.26.0.tar.gz 2024-10-30 18:11 6.0M
MOSim_2.2.0.tar.gz 2024-10-30 16:00 5.9M
TreeAndLeaf_1.18.0.tar.gz 2024-10-30 18:11 5.9M
projectR_1.22.0.tar.gz 2024-10-30 16:00 5.9M
GUIDEseq_1.36.0.tar.gz 2024-10-30 16:00 5.9M
cytolib_2.18.2.tar.gz 2025-01-27 17:20 5.8M
microRNA_1.64.0.tar.gz 2024-10-30 16:00 5.7M
PureCN_2.12.0.tar.gz 2024-10-30 16:00 5.7M
MutationalPatterns_3.16.0.tar.gz 2024-10-30 16:00 5.7M
BgeeCall_1.22.0.tar.gz 2024-10-31 16:00 5.7M
RiboCrypt_1.12.0.tar.gz 2024-10-30 16:00 5.7M
marray_1.84.0.tar.gz 2024-10-30 16:00 5.6M
BSgenome_1.74.0.tar.gz 2024-10-30 16:00 5.6M
ideal_2.0.0.tar.gz 2024-10-30 16:00 5.6M
CEMiTool_1.30.0.tar.gz 2024-10-30 16:00 5.5M
DOSE_4.0.1.tar.gz 2025-03-31 16:20 5.5M
hdxmsqc_1.2.0.tar.gz 2024-10-30 16:00 5.5M
ropls_1.38.0.tar.gz 2024-10-30 16:00 5.5M
benchdamic_1.12.2.tar.gz 2025-01-09 17:20 5.5M
sights_1.32.0.tar.gz 2024-10-30 18:11 5.4M
seqPattern_1.38.0.tar.gz 2024-10-30 18:11 5.4M
limmaGUI_1.82.0.tar.gz 2024-10-30 16:00 5.4M
GDCRNATools_1.26.0.tar.gz 2024-10-30 16:00 5.3M
ChromSCape_1.16.0.tar.gz 2024-10-30 16:00 5.3M
epivizrChart_1.28.0.tar.gz 2024-10-30 16:00 5.3M
monaLisa_1.12.0.tar.gz 2024-10-30 16:00 5.3M
TFEA.ChIP_1.26.0.tar.gz 2024-10-30 18:11 5.3M
GenVisR_1.38.0.tar.gz 2024-10-30 16:00 5.3M
signatureSearch_1.20.0.tar.gz 2024-10-30 18:11 5.2M
Ularcirc_1.24.0.tar.gz 2024-10-30 18:11 5.2M
EBImage_4.48.0.tar.gz 2024-10-30 16:00 5.2M
MethReg_1.16.0.tar.gz 2025-01-30 17:20 5.2M
GOfuncR_1.26.0.tar.gz 2024-10-30 16:00 5.2M
Cardinal_3.8.3.tar.gz 2024-12-23 17:20 5.2M
tradeSeq_1.20.0.tar.gz 2024-10-30 18:11 5.2M
VplotR_1.16.0.tar.gz 2024-10-30 18:11 5.2M
SpatialExperiment_1.16.0.tar.gz 2024-10-30 18:11 5.2M
cTRAP_1.24.0.tar.gz 2024-10-30 16:00 5.1M
HiCBricks_1.24.0.tar.gz 2024-10-30 16:00 5.1M
flowFP_1.64.0.tar.gz 2024-10-30 16:00 5.1M
CytoMDS_1.2.0.tar.gz 2024-10-30 16:00 5.1M
MACSr_1.14.0.tar.gz 2024-10-30 16:00 5.1M
SpatialDecon_1.16.0.tar.gz 2024-10-30 18:11 5.1M
flowWorkspace_4.18.1.tar.gz 2025-03-13 16:20 5.1M
R3CPET_1.38.0.tar.gz 2024-10-30 16:00 5.1M
ShortRead_1.64.0.tar.gz 2024-10-30 18:11 5.1M
OMICsPCA_1.24.0.tar.gz 2024-10-30 16:00 5.0M
scMultiSim_1.2.0.tar.gz 2024-10-30 16:00 5.0M
decoupleR_2.12.0.tar.gz 2024-10-30 16:00 5.0M
Banksy_1.2.0.tar.gz 2024-10-30 16:00 5.0M
MEAT_1.18.0.tar.gz 2024-10-30 16:00 5.0M
STATegRa_1.42.0.tar.gz 2024-10-30 18:11 4.9M
Rhtslib_3.2.0.tar.gz 2024-10-30 16:00 4.9M
EnMCB_1.18.0.tar.gz 2024-10-30 16:00 4.9M
fobitools_1.14.0.tar.gz 2024-10-30 16:00 4.9M
FlowSOM_2.14.0.tar.gz 2024-10-30 16:00 4.9M
Scale4C_1.28.0.tar.gz 2024-10-30 16:00 4.9M
pmp_1.18.0.tar.gz 2024-10-30 16:00 4.9M
CaMutQC_1.2.0.tar.gz 2024-10-30 16:00 4.8M
nullranges_1.12.0.tar.gz 2024-10-30 16:00 4.8M
recountmethylation_1.16.0.tar.gz 2024-10-30 16:00 4.8M
SpliceWiz_1.8.0.tar.gz 2024-10-30 18:11 4.8M
branchpointer_1.32.0.tar.gz 2024-10-30 16:00 4.8M
Sconify_1.26.0.tar.gz 2024-10-30 16:00 4.8M
BioNERO_1.14.0.tar.gz 2024-10-30 16:00 4.8M
mapscape_1.30.0.tar.gz 2024-10-30 16:00 4.8M
MicrobiotaProcess_1.18.0.tar.gz 2024-10-30 16:00 4.8M
GWENA_1.16.0.tar.gz 2024-10-30 16:00 4.8M
ASpli_2.16.0.tar.gz 2024-10-30 16:00 4.8M
biscuiteer_1.20.0.tar.gz 2024-10-30 16:00 4.8M
mnem_1.22.0.tar.gz 2024-10-30 16:00 4.8M
protGear_1.10.0.tar.gz 2024-10-30 16:00 4.8M
doubletrouble_1.6.1.tar.gz 2025-03-17 16:20 4.8M
fgsea_1.32.4.tar.gz 2025-03-24 16:20 4.8M
compcodeR_1.42.0.tar.gz 2024-10-30 16:00 4.7M
structToolbox_1.18.2.tar.gz 2025-02-24 17:20 4.7M
multiHiCcompare_1.24.0.tar.gz 2024-10-30 16:00 4.7M
limpca_1.2.0.tar.gz 2024-10-30 16:00 4.7M
variancePartition_1.36.3.tar.gz 2025-01-13 17:20 4.7M
retrofit_1.6.0.tar.gz 2024-10-30 16:00 4.7M
flowClean_1.44.0.tar.gz 2024-10-30 16:00 4.7M
GGPA_1.18.0.tar.gz 2024-10-30 16:00 4.7M
AssessORF_1.24.0.tar.gz 2024-10-30 16:00 4.7M
fedup_1.14.0.tar.gz 2024-10-30 16:00 4.7M
DAMEfinder_1.18.0.tar.gz 2024-10-30 16:00 4.7M
CNVMetrics_1.10.0.tar.gz 2024-10-30 16:00 4.7M
MatrixQCvis_1.14.0.tar.gz 2024-10-30 16:00 4.7M
pathlinkR_1.2.0.tar.gz 2024-10-30 16:00 4.7M
RiboProfiling_1.36.0.tar.gz 2024-10-30 16:00 4.7M
sevenbridges_1.36.0.tar.gz 2024-10-30 18:11 4.7M
scBubbletree_1.8.0.tar.gz 2024-10-30 16:00 4.7M
Pedixplorer_1.2.0.tar.gz 2024-10-30 16:00 4.6M
CCPlotR_1.4.0.tar.gz 2024-10-30 16:00 4.6M
partCNV_1.4.0.tar.gz 2024-10-30 16:00 4.6M
CAFE_1.42.0.tar.gz 2024-10-30 16:00 4.6M
scFeatureFilter_1.26.0.tar.gz 2024-10-30 16:00 4.6M
BridgeDbR_2.16.0.tar.gz 2024-10-30 16:00 4.6M
TIN_1.38.0.tar.gz 2024-10-30 18:11 4.6M
IONiseR_2.30.0.tar.gz 2024-10-30 16:00 4.6M
synapter_2.30.0.tar.gz 2024-10-30 18:11 4.6M
RCX_1.10.0.tar.gz 2024-10-30 16:00 4.6M
interactiveDisplay_1.44.0.tar.gz 2024-10-30 16:00 4.6M
simpleSeg_1.8.1.tar.gz 2025-03-20 16:20 4.6M
cbpManager_1.14.0.tar.gz 2024-10-30 16:00 4.5M
GeoDiff_1.12.0.tar.gz 2024-10-30 16:00 4.5M
crisprScore_1.10.0.tar.gz 2024-10-30 16:00 4.5M
PING_2.50.0.tar.gz 2024-10-30 16:00 4.5M
Moonlight2R_1.4.0.tar.gz 2024-10-30 16:00 4.5M
scry_1.18.0.tar.gz 2024-10-30 16:00 4.5M
SeqSQC_1.28.0.tar.gz 2024-10-30 18:11 4.5M
biosigner_1.34.0.tar.gz 2024-10-30 16:00 4.5M
ribor_1.18.0.tar.gz 2024-10-30 16:00 4.5M
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