# Run workflows implemented in Terra/AnVIL workspace

## Documentation for package ‘AnVILWorkflow’ version 1.8.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

.getAgeMinMax | Apply to the returned value from '.avSampleData' function
.search_keyword | Search keywords in a given metadata table
.tableToString | Summary table into a single string where the column name and the value is separated by 'sep' and columns are separated by 'delim'
AnVILBrowse | Search AnVIL workspaces using keywords
availableAnalysis | Find the available analysis
cloneWorkspace | Clone template workspace
currentInput | Check the current input arguments
findInputName | Find the root entity name
getAllDataTables | Get all the data tables
getAllWorkflows | Collect workflows from all workspaces a user has access to
getAllWorkspaces | Get AnVIL workspaces
getDashboard | Print out Dashboard contents
getData | Creates a metadata table of data from all workspaces provided
getOutput | Download output files from Terra
getWorkflowConfig | Check the workflow configuration
getWorkflows | Creates a metadata table of workflows from all workspaces provided
getWorkspaces | Creates a metadata table of all workspaces
monitorWorkflow | Check the status of submitted jobs
runWorkflow | Launch Terra workflow
setCloudEnv | Setup Google Cloud Account and Project
stopWorkflow | Abort submitted job
updateInput | Update the input