Package: FitHiC
Type: Package
Title: Confidence estimation for intra-chromosomal contact maps
Version: 1.34.0
Date: 2017-04-12
Authors@R: c(person("Ferhat", "Ay", role = "aut", comment =
        "Python original, https://noble.gs.washington.edu/proj/fit-hi-c/"),
    person(c("Timothy", "L."), "Bailey", role = "aut"),
    person(c("William", "S."), "Noble", role = "aut"),
    person("Ruyu", "Tan", role = c("aut", "cre", "trl"), comment =
        "R port", email = "rut003@ucsd.edu"))
Description: Fit-Hi-C is a tool for assigning statistical confidence estimates
    to intra-chromosomal contact maps produced by genome-wide genome
    architecture assays such as Hi-C.
License: GPL (>= 2)
biocViews: DNA3DStructure, Software
Imports: data.table, fdrtool, grDevices, graphics, Rcpp, stats, utils
LinkingTo: Rcpp
RoxygenNote: 5.0.1
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
git_url: https://git.bioconductor.org/packages/FitHiC
git_branch: RELEASE_3_21
git_last_commit: 8f40efd
git_last_commit_date: 2025-04-15
Repository: Bioconductor 3.21
Date/Publication: 2025-04-15
NeedsCompilation: yes
Packaged: 2025-04-16 00:47:11 UTC; biocbuild
Author: Ferhat Ay [aut] (Python original,
    https://noble.gs.washington.edu/proj/fit-hi-c/),
  Timothy L. Bailey [aut],
  William S. Noble [aut],
  Ruyu Tan [aut, cre, trl] (R port)
Maintainer: Ruyu Tan <rut003@ucsd.edu>
Built: R 4.5.0; x86_64-w64-mingw32; 2025-04-16 14:27:51 UTC; windows
Archs: x64
