# Generated by roxygen2: do not edit by hand

export(binBSGenome)
export(binChroms)
export(binRegion)
export(calcChromBins)
export(calcChromBinsRef)
export(calcCumulativePartitions)
export(calcCumulativePartitionsRef)
export(calcDinuclFreq)
export(calcDinuclFreqRef)
export(calcExpectedPartitions)
export(calcExpectedPartitionsRef)
export(calcFeatureDist)
export(calcFeatureDistRefTSS)
export(calcGCContent)
export(calcGCContentRef)
export(calcNearestNeighbors)
export(calcNeighborDist)
export(calcPartitions)
export(calcPartitionsRef)
export(calcSummarySignal)
export(calcWidth)
export(dtToGr)
export(genomePartitionList)
export(getChromSizes)
export(getChromSizesFromFasta)
export(getGeneModels)
export(getGeneModelsFromGTF)
export(getGenomeBins)
export(getTssFromGTF)
export(loadBSgenome)
export(loadEnsDb)
export(nlist)
export(plotChromBins)
export(plotCumulativePartitions)
export(plotDinuclFreq)
export(plotExpectedPartitions)
export(plotFeatureDist)
export(plotGCContent)
export(plotNeighborDist)
export(plotPartitions)
export(plotQTHist)
export(plotSummarySignal)
export(retrieveFile)
import(dplyr)
import(ggplot2)
importFrom(Biostrings,alphabetFrequency)
importFrom(Biostrings,readDNAStringSet)
importFrom(GenomicRanges,GRanges)
importFrom(GenomicRanges,GRangesList)
importFrom(GenomicRanges,elementMetadata)
importFrom(GenomicRanges,granges)
importFrom(GenomicRanges,makeGRangesFromDataFrame)
importFrom(GenomicRanges,seqnames)
importFrom(GenomicRanges,strand)
importFrom(IRanges,IRanges)
importFrom(IRanges,Views)
importFrom(data.table,":=")
importFrom(data.table,as.data.table)
importFrom(data.table,copy)
importFrom(data.table,data.table)
importFrom(data.table,foverlaps)
importFrom(data.table,fread)
importFrom(data.table,is.data.table)
importFrom(data.table,rbindlist)
importFrom(data.table,setDT)
importFrom(data.table,setattr)
importFrom(data.table,setcolorder)
importFrom(data.table,setkey)
importFrom(data.table,setnames)
importFrom(data.table,setorder)
importFrom(data.table,tstrsplit)
importFrom(methods,is)
importFrom(reshape2,melt)
importFrom(stats,chisq.test)
importFrom(utils,data)
importFrom(utils,download.file)
importFrom(utils,getAnywhere)
importFrom(utils,globalVariables)
importFrom(utils,installed.packages)
