Package: Polytect
Title: An R package for digital data clustering
Version: 1.0.0
Authors@R: 
    person("Yao", "Chen", , "emmachentar@live.com", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0001-8172-3996"))
Description: Polytect is an advanced computational tool designed for the analysis of multi-color digital PCR data. It provides automatic clustering and labeling of partitions into distinct groups based on clusters first identified by the flowPeaks algorithm. Polytect is particularly useful for researchers in molecular biology and bioinformatics, enabling them to gain deeper insights into their experimental results through precise partition classification and data visualization.
biocViews: ddPCR, Clustering, MultiChannel, Classification
License: Artistic-2.0
URL: https://github.com/emmachenlingo/Polytect
BugReports: https://github.com/emmachenlingo/Polytect/issues
Encoding: UTF-8
LazyData: false
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Depends: R (>= 4.4.0)
Imports: stats, utils, grDevices, mvtnorm, sn, dplyr, flowPeaks,
        ggplot2, tidyverse, cowplot, mlrMBO, DiceKriging, smoof,
        ParamHelpers, lhs, rgenoud, BiocManager
Suggests: testthat (>= 3.0.0), knitr, rmarkdown, ddPCRclust
VignetteBuilder: knitr
Config/testthat/edition: 3
git_url: https://git.bioconductor.org/packages/Polytect
git_branch: RELEASE_3_21
git_last_commit: 86f1b81
git_last_commit_date: 2025-04-15
Repository: Bioconductor 3.21
Date/Publication: 2025-04-15
NeedsCompilation: no
Packaged: 2025-04-16 02:56:19 UTC; biocbuild
Author: Yao Chen [aut, cre] (ORCID: <https://orcid.org/0000-0001-8172-3996>)
Maintainer: Yao Chen <emmachentar@live.com>
Built: R 4.5.0; ; 2025-04-16 15:10:21 UTC; windows
