Package: geyser
Title: Gene Expression displaYer of SummarizedExperiment in R
Version: 1.0.0
Authors@R: 
    person(given = "David",
           family = "McGaughey",
           role = c("aut", "cre"),
           email = "mcgaughey@gmail.com",
           comment=c(ORCID="0000-0002-9224-2888"))
Description: Lightweight Expression displaYer (plotter / viewer) of SummarizedExperiment object in R. This package provides a quick and easy Shiny-based GUI to empower a user to use a SummarizedExperiment object to view  (gene) expression grouped from the sample metadata columns (in the `colData` slot). Feature expression can either be viewed with a box plot or a heatmap. 
License: CC0
biocViews: Software, ShinyApps, GUI, GeneExpression
Imports: bslib (>= 0.6.0), BiocStyle, ComplexHeatmap, dplyr, DT,
        ggbeeswarm, ggplot2, htmltools, magrittr, shiny,
        SummarizedExperiment, tibble, tidyselect, tidyr
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Suggests: airway, knitr, DESeq2, recount3, rmarkdown, stringr, testthat
        (>= 3.0.0)
Config/testthat/edition: 3
VignetteBuilder: knitr
URL: https://github.com/davemcg/geyser
BugReports: https://github.com/davemcg/geyser/issues
git_url: https://git.bioconductor.org/packages/geyser
git_branch: RELEASE_3_21
git_last_commit: f9edc72
git_last_commit_date: 2025-04-15
Repository: Bioconductor 3.21
Date/Publication: 2025-04-15
NeedsCompilation: no
Packaged: 2025-04-16 00:59:15 UTC; biocbuild
Author: David McGaughey [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-9224-2888>)
Maintainer: David McGaughey <mcgaughey@gmail.com>
Depends: R (>= 3.5.0)
Built: R 4.5.0; ; 2025-04-16 14:33:45 UTC; windows
