Package: igvR
Type: Package
Title: igvR: integrative genomics viewer
Version: 1.28.0
Date: 2023-10-09
Author: Paul Shannon
Maintainer: Arkadiusz Gladki <gladki.arkadiusz@gmail.com>
Depends: R (>= 3.5.0), GenomicRanges, GenomicAlignments, BrowserViz (>=
        2.17.1)
Imports: methods, BiocGenerics, httpuv, utils, rtracklayer,
        VariantAnnotation, RColorBrewer, httr
Suggests: RUnit, BiocStyle, knitr, rmarkdown, MotifDb, seqLogo
Description: Access to igv.js, the Integrative Genomics Viewer running in a web browser.
URL: https://gladkia.github.io/igvR/
License: MIT + file LICENSE
LazyLoad: yes
biocViews: Visualization, ThirdPartyClient, GenomeBrowsers
Collate: 'Track.R' 'igvAnnotationTrack.R' 'UCSCBedAnnotationTrack.R'
        'DataFrameAnnotationTrack.R' 'VariantTrack.R'
        'QuantitativeTrack.R' 'DataFrameQuantitativeTrack.R'
        'UCSCBedGraphQuantitativeTrack.R' 'GRangesAnnotationTrack.R'
        'GRangesQuantitativeTrack.R' 'GenomicAlignmentTrack.R'
        'BedpeInteractionsTrack.R' 'RemoteAlignmentTrack.R'
        'GWASTrack.R' 'GWASUrlTrack.R' 'GFF3Track.R' 'genomeSpec.R'
        'igvR.R'
NeedsCompilation: no
Packaged: 2025-04-16 01:24:42 UTC; biocbuild
VignetteBuilder: knitr
Encoding: UTF-8
RoxygenNote: 7.2.3
git_url: https://git.bioconductor.org/packages/igvR
git_branch: RELEASE_3_21
git_last_commit: 9475860
git_last_commit_date: 2025-04-15
Repository: Bioconductor 3.21
Date/Publication: 2025-04-15
Built: R 4.5.0; ; 2025-04-16 14:41:37 UTC; windows
