Package: metabinR
Type: Package
Title: Abundance and Compositional Based Binning of Metagenomes
Version: 1.10.0
biocViews: Classification, Clustering, Microbiome, Sequencing, Software
Authors@R: 
    c(person(given = "Anestis",
             family = "Gkanogiannis",
             role = c("aut", "cre"),
             email = "anestis@gkanogiannis.com",
             comment = c(ORCID = "0000-0002-6441-0688"))
    )
Description: Provide functions for performing abundance and compositional based 
    binning on metagenomic samples, directly from FASTA or FASTQ files.
    Functions are implemented in Java and called via rJava.
    Parallel implementation that operates directly on input FASTA/FASTQ files 
    for fast execution.
License: GPL-3
Encoding: UTF-8
Language: en-US
Depends: R (>= 4.3)
Imports: methods, rJava
SystemRequirements: Java (>= 8)
RoxygenNote: 7.3.1
URL: https://github.com/gkanogiannis/metabinR
BugReports: https://github.com/gkanogiannis/metabinR/issues
Suggests: BiocStyle, cvms, data.table, dplyr, ggplot2, gridExtra,
        knitr, R.utils, rmarkdown, sabre, spelling, testthat (>= 3.0.0)
VignetteBuilder: knitr
Config/testthat/edition: 3
git_url: https://git.bioconductor.org/packages/metabinR
git_branch: RELEASE_3_21
git_last_commit: f3a7794
git_last_commit_date: 2025-04-15
Repository: Bioconductor 3.21
Date/Publication: 2025-04-15
NeedsCompilation: no
Packaged: 2025-04-16 01:48:11 UTC; biocbuild
Author: Anestis Gkanogiannis [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-6441-0688>)
Maintainer: Anestis Gkanogiannis <anestis@gkanogiannis.com>
Built: R 4.5.0; ; 2025-04-16 14:50:33 UTC; windows
