Package: rTRM
Type: Package
Title: Identification of Transcriptional Regulatory Modules from
        Protein-Protein Interaction Networks
Version: 1.46.0
Date: 2015-12-25
Author: Diego Diez
Depends: R (>= 2.10), igraph (>= 1.0)
Imports: methods, AnnotationDbi, DBI, RSQLite
Suggests: RUnit, BiocGenerics, MotifDb, graph, PWMEnrich, biomaRt,
        Biostrings, BSgenome.Mmusculus.UCSC.mm8.masked, org.Hs.eg.db,
        org.Mm.eg.db, ggplot2, BiocStyle, knitr, rmarkdown
Maintainer: Diego Diez <diego10ruiz@gmail.com>
Description: rTRM identifies transcriptional regulatory modules (TRMs)
        from protein-protein interaction networks.
License: GPL-3
LazyLoad: yes
ByteCompile: yes
VignetteBuilder: knitr
biocViews: Transcription, Network, GeneRegulation, GraphAndNetwork
URL: https://github.com/ddiez/rTRM
BugReports: https://github.com/ddiez/rTRM/issues
git_url: https://git.bioconductor.org/packages/rTRM
git_branch: RELEASE_3_21
git_last_commit: f880211
git_last_commit_date: 2025-04-15
Repository: Bioconductor 3.21
Date/Publication: 2025-04-15
NeedsCompilation: no
Packaged: 2025-04-16 03:24:49 UTC; biocbuild
Built: R 4.5.0; ; 2025-04-16 15:24:10 UTC; windows
