# R package associated to BREW3R

## Documentation for package ‘BREW3R.r’ version 1.6.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

add_new_exons | Add new exons
adjust_for_collision | Adjust for collision
debug_msg | Display debug messages if verbose allows it
extend_granges | Extend GRanges
extend_using_overlap | Overlap exons and extend three prime end
extract_last_exons | Extract last exons
filter_new_exons | Filter new exons for collision
five_prime_pos | Get five prime position
overlap_different_genes | Get overlaps from different genes
progression_msg | Display progression messages if verbose allows it
three_prime_pos | Get three prime position