Package: ChIPseqR
Type: Package
Title: Identifying Protein Binding Sites in High-Throughput Sequencing
        Data
Version: 1.64.0
Date: 2015-12-17
Author: Peter Humburg
Maintainer: Peter Humburg <peter.humburg@gmail.com>
Depends: R (>= 2.10.0), methods, BiocGenerics, S4Vectors (>= 0.9.25)
Imports: Biostrings, fBasics, GenomicRanges, IRanges (>= 2.5.14),
        graphics, grDevices, HilbertVis, ShortRead, stats, timsac,
        utils
Description: ChIPseqR identifies protein binding sites from ChIP-seq
        and nucleosome positioning experiments. The model used to
        describe binding events was developed to locate nucleosomes but
        should flexible enough to handle other types of experiments as
        well.
License: GPL (>= 2)
LazyLoad: yes
Collate: classes.R generics.R initialize.R methods.R access.R package.R
biocViews: ChIPSeq, Infrastructure
Config/pak/sysreqs: libbz2-dev libjpeg-dev liblzma-dev libpng-dev
        xz-utils zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2025-10-29 14:03:52 UTC
RemoteUrl: https://github.com/bioc/ChIPseqR
RemoteRef: RELEASE_3_22
RemoteSha: 544d5eb2bd49558614b50e83e3b1e16689439697
NeedsCompilation: yes
Packaged: 2026-02-24 09:16:45 UTC; root
Built: R 4.5.2; x86_64-w64-mingw32; 2026-02-24 09:18:41 UTC; windows
Archs: x64
