Package: ERSSA
Type: Package
Title: Empirical RNA-seq Sample Size Analysis
Version: 1.28.0
Date: 2020-01-21
Author: Zixuan Shao [aut, cre]
Maintainer: Zixuan Shao <Zixuanshao.zach@gmail.com>
Description: The ERSSA package takes user supplied RNA-seq differential
        expression dataset and calculates the number of differentially
        expressed genes at varying biological replicate levels. This
        allows the user to determine, without relying on any a priori
        assumptions, whether sufficient differential detection has been
        acheived with their RNA-seq dataset.
Depends: R (>= 4.0.0)
Imports: edgeR (>= 3.23.3), DESeq2 (>= 1.21.16), ggplot2 (>= 3.0.0),
        RColorBrewer (>= 1.1-2), plyr (>= 1.8.4), BiocParallel (>=
        1.15.8), apeglm (>= 1.4.2), grDevices, stats, utils
Suggests: BiocStyle, knitr, rmarkdown
VignetteBuilder: knitr
biocViews: ImmunoOncology, GeneExpression, Transcription,
        DifferentialExpression, RNASeq, MultipleComparison,
        QualityControl
License: GPL-3 | file LICENSE
Encoding: UTF-8
LazyData: true
URL: https://github.com/zshao1/ERSSA
RoxygenNote: 7.0.2
Config/pak/sysreqs: zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2025-10-29 14:47:37 UTC
RemoteUrl: https://github.com/bioc/ERSSA
RemoteRef: RELEASE_3_22
RemoteSha: d746337199c987eb87203439d3da1f358b93c4fe
NeedsCompilation: no
Packaged: 2026-03-05 07:56:23 UTC; root
Built: R 4.5.2; ; 2026-03-05 07:58:12 UTC; windows
