PomaBatch               Batch Correction
PomaBoxplots            Boxplots and Violin Plots
PomaClust               Cluster Analysis
PomaCorr                Correlation Analysis
PomaCreateObject        Create a 'SummarizedExperiment' Object
PomaDESeq               Differential Expression Analysis Based on the
                        Negative Binomial Distribution
PomaDensity             Density Plots
PomaEnrichment          Enrichment Analysis
PomaHeatmap             Heatmap Plot
PomaImpute              Impute Missing Values
PomaLM                  Linear Models
PomaLMM                 Linear Mixed Models
PomaLasso               Lasso, Ridge, and Elasticnet Regularized
                        Generalized Linear Models for Binary Outcomes
PomaLimma               Differential Expression Analysis Using 'limma'
PomaNorm                Normalize Data
PomaOddsRatio           Logistic Regression Model Odds Ratios
PomaOutliers            Analyse and Remove Statistical Outliers
PomaPCA                 Principal Components Analysis
PomaPCR                 Principal Components Regression
PomaPLS                 Partial Least Squares Methods
PomaRandForest          Classification Random Forest
PomaRankProd            Rank Product/Rank Sum Analysis
PomaUMAP                Dimensionality Reduction with UMAP
PomaUnivariate          Univariate Statistical Test
PomaVolcano             Volcano Plot
box_cox_transformation
                        Box-Cox Transformation
cor_pmat                Correlation P-Values
detect_decimals         Detect decimals
flattenCorrMatrix       Flatten Correlation Matrix
poma_pal_c              Return function to interpolate a continuous
                        POMA color palette
poma_pal_d              Return function to interpolate a discrete POMA
                        color palette
quantile_norm           Sample Quantile Normalization
scale_color_poma_c      Color scale constructor for continuous
                        'viridis' "plasma" palette
scale_color_poma_d      Color scale constructor for discrete 'viridis'
                        "plasma" palette
scale_fill_poma_c       Fill scale constructor for continuous 'viridis'
                        "plasma" palette
scale_fill_poma_d       Fill scale constructor for discrete 'viridis'
                        "plasma" palette
st000284                Colorectal Cancer Detection Using Targeted
                        Serum Metabolic Profiling
st000336                Targeted LC/MS of urine from boys with DMD and
                        controls
sum_norm                Sample Sum Normalization
theme_poma              A ggplot theme which allow custom yet
                        consistent styling of plots in the POMA package
                        and web app.
