Package: ompBAM
Title: C++ Library for OpenMP-based multi-threaded sequential profiling
        of Binary Alignment Map (BAM) files
Version: 1.14.0
Date: 2024-09-14
Authors@R: c(person("Alex Chit Hei", "Wong", email="alexchwong.github@gmail.com", 
		role=c("aut", "cre", "cph")))
Description: This packages provides C++ header files for developers
        wishing to create R packages that processes BAM files. ompBAM
        automates file access, memory management, and handling of
        multiple threads 'behind the scenes', so developers can focus
        on creating domain-specific functionality. The included
        vignette contains detailed documentation of this API, including
        quick-start instructions to create a new ompBAM-based package,
        and step-by-step explanation of the functionality behind the
        example packaged included within ompBAM.
License: MIT + file LICENSE
Imports: utils, Rcpp
Suggests: RcppProgress, knitr, rmarkdown, roxygen2, devtools, usethis,
        desc, testthat (>= 3.0.0)
VignetteBuilder: knitr
biocViews: Alignment, DataImport, RNASeq, Software, Sequencing,
        Transcriptomics, SingleCell
Encoding: UTF-8
RoxygenNote: 7.3.2
URL: https://github.com/alexchwong/ompBAM
BugReports: https://support.bioconductor.org/
Config/testthat/edition: 3
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2025-10-29 15:16:35 UTC
RemoteUrl: https://github.com/bioc/ompBAM
RemoteRef: RELEASE_3_22
RemoteSha: bbcbda1f762190d0bf8ad5c9c951d7bcee596b1b
NeedsCompilation: no
Packaged: 2026-03-01 09:25:20 UTC; root
Author: Alex Chit Hei Wong [aut, cre, cph]
Maintainer: Alex Chit Hei Wong <alexchwong.github@gmail.com>
Built: R 4.5.2; ; 2026-03-01 09:26:30 UTC; windows
