Package: phosphonormalizer
Type: Package
Title: Compensates for the bias introduced by median normalization in
Version: 1.34.0
Date: 2016-11-11
Authors@R: 
  c(
        person(
                given = "Sohrab",
                family = "Saraei",
                role = c("aut", "cre"),
                email = "sohrab.saraei@blueprintgenetics.com"
        ),
        person(
                given = "Tomi",
                family = "Suomi",
                role = "ctb"
        ),
        person(
                given = "Otto",
                family = "Kauko",
                role = "ctb"
        ),
        person(
                given = "Laura",
                family = "Elo",
                role = "ths"
        )
   )
Description: It uses the overlap between enriched and non-enriched
        datasets to compensate for the bias introduced in global
        phosphorylation after applying median normalization.
biocViews: Software, StatisticalMethod, WorkflowStep, Normalization,
        Proteomics
License: GPL (>= 2)
Imports: plyr, stats, graphics, matrixStats, methods
Suggests: knitr, rmarkdown, testthat
Enhances: MSnbase
Depends: R (>= 4.0)
VignetteBuilder: knitr
NeedsCompilation: no
LazyData: true
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2025-10-29 14:35:40 UTC
RemoteUrl: https://github.com/bioc/phosphonormalizer
RemoteRef: RELEASE_3_22
RemoteSha: fc6df69c32901e4df840b972ec1f92ebc0fbb870
Packaged: 2026-03-01 07:58:04 UTC; root
Author: Sohrab Saraei [aut, cre],
  Tomi Suomi [ctb],
  Otto Kauko [ctb],
  Laura Elo [ths]
Maintainer: Sohrab Saraei <sohrab.saraei@blueprintgenetics.com>
Built: R 4.5.2; ; 2026-03-01 07:59:37 UTC; windows
