# Generated by roxygen2: do not edit by hand

export(corHeatmap)
export(createTomo)
export(embedPlot)
export(expHeatmap)
export(findPeak)
export(findPeakGene)
export(geneCorHeatmap)
export(geneEmbedPlot)
export(hierarchClust)
export(kmeansClust)
export(linePlot)
export(normalizeTomo)
export(runPCA)
export(runTSNE)
export(runUMAP)
export(scaleTomo)
export(tomoMatrix)
export(tomoSummarizedExperiment)
importFrom(RColorBrewer,brewer.pal)
importFrom(Rtsne,Rtsne)
importFrom(SummarizedExperiment,"assay<-")
importFrom(SummarizedExperiment,"colData<-")
importFrom(SummarizedExperiment,"rowData<-")
importFrom(SummarizedExperiment,SummarizedExperiment)
importFrom(SummarizedExperiment,assay)
importFrom(SummarizedExperiment,assayNames)
importFrom(SummarizedExperiment,colData)
importFrom(SummarizedExperiment,rowData)
importFrom(ggplot2,aes_string)
importFrom(ggplot2,annotation_raster)
importFrom(ggplot2,coord_cartesian)
importFrom(ggplot2,element_blank)
importFrom(ggplot2,element_text)
importFrom(ggplot2,facet_wrap)
importFrom(ggplot2,geom_line)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_raster)
importFrom(ggplot2,geom_smooth)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,ggplot_build)
importFrom(ggplot2,guide_legend)
importFrom(ggplot2,guides)
importFrom(ggplot2,labs)
importFrom(ggplot2,scale_color_manual)
importFrom(ggplot2,scale_fill_distiller)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_bw)
importFrom(ggrepel,geom_text_repel)
importFrom(grDevices,rainbow)
importFrom(methods,new)
importFrom(reshape2,melt)
importFrom(stats,cor)
importFrom(stats,dist)
importFrom(stats,hclust)
importFrom(stats,kmeans)
importFrom(stats,median)
importFrom(stats,p.adjust)
importFrom(stats,prcomp)
importFrom(stats,sd)
importFrom(umap,umap)
