Index of /packages/3.22/bioc/src/contrib
Name Last modified Size
Parent Directory -
Meta/ 2025-10-08 17:11 -
Archive/ 2026-04-06 16:15 -
ZygosityPredictor_1.10.0.tar.gz 2025-10-30 16:47 827K
zitools_1.4.0.tar.gz 2025-10-30 16:47 253K
zinbwave_1.32.0.tar.gz 2025-10-30 16:47 490K
zFPKM_1.32.0.tar.gz 2025-10-30 16:47 148K
zenith_1.12.0.tar.gz 2025-10-30 16:47 667K
zellkonverter_1.20.1.tar.gz 2026-01-01 17:15 1.4M
yarn_1.36.0.tar.gz 2025-10-30 16:47 3.0M
YAPSA_1.36.1.tar.gz 2025-12-04 17:15 4.2M
yamss_1.36.0.tar.gz 2025-10-30 16:47 425K
XVector_0.50.0.tar.gz 2025-10-30 16:47 70K
xmapbridge_1.68.0.tar.gz 2025-10-30 16:47 3.0M
XINA_1.28.0.tar.gz 2025-10-30 16:47 2.8M
Xeva_1.26.0.tar.gz 2025-10-30 16:47 1.6M
xenLite_1.4.0.tar.gz 2025-10-30 16:47 3.3M
XeniumIO_1.2.0.tar.gz 2025-10-30 16:47 230K
XDE_2.56.0.tar.gz 2025-10-30 16:47 1.3M
xcore_1.14.0.tar.gz 2025-10-30 16:47 2.4M
xcms_4.8.0.tar.gz 2025-10-30 16:47 9.1M
xCell2_1.2.3.tar.gz 2025-12-15 17:15 3.1M
XAItest_1.2.2.tar.gz 2026-03-26 16:15 1.3M
Wrench_1.28.0.tar.gz 2025-10-30 16:47 225K
wppi_1.18.0.tar.gz 2025-11-24 17:15 648K
wpm_1.20.0.tar.gz 2025-10-30 16:47 2.4M
wiggleplotr_1.34.1.tar.gz 2026-04-04 16:15 440K
widgetTools_1.88.0.tar.gz 2025-10-30 16:47 229K
weitrix_1.22.0.tar.gz 2025-10-30 16:47 9.5M
webbioc_1.82.0.tar.gz 2025-10-30 16:47 312K
weaver_1.76.0.tar.gz 2025-10-30 16:16 233K
wavClusteR_2.44.0.tar.gz 2025-10-30 16:47 782K
wateRmelon_2.16.0.tar.gz 2025-10-30 16:47 3.3M
waddR_1.24.0.tar.gz 2025-10-30 16:47 154K
vulcan_1.32.0.tar.gz 2025-10-30 16:47 392K
vtpnet_0.50.0.tar.gz 2025-10-30 16:47 20M
vsn_3.78.1.tar.gz 2026-01-19 17:15 1.9M
vsclust_1.12.0.tar.gz 2025-10-30 16:47 3.7M
VplotR_1.20.0.tar.gz 2025-10-30 16:47 5.2M
Voyager_1.12.0.tar.gz 2025-10-30 16:47 4.0M
vmrseq_1.2.0.tar.gz 2025-10-30 16:47 3.0M
vissE_1.18.0.tar.gz 2025-10-30 16:47 1.6M
visiumStitched_1.2.0.tar.gz 2025-10-30 16:47 3.2M
VisiumIO_1.6.3.tar.gz 2025-11-27 17:15 1.8M
ViSEAGO_1.24.0.tar.gz 2025-10-30 16:16 8.6M
viper_1.44.0.tar.gz 2025-10-30 16:47 505K
vidger_1.30.0.tar.gz 2025-10-30 16:47 7.9M
VERSO_1.20.0.tar.gz 2025-10-30 16:16 678K
VennDetail_1.26.1.tar.gz 2026-03-19 16:15 499K
veloviz_1.16.0.tar.gz 2025-10-30 16:16 3.6M
velociraptor_1.20.0.tar.gz 2025-10-30 16:47 792K
VegaMC_3.48.0.tar.gz 2025-10-30 16:16 1.8M
VDJdive_1.12.0.tar.gz 2025-10-30 16:16 543K
VCFArray_1.26.0.tar.gz 2025-10-30 16:16 303K
vbmp_1.78.0.tar.gz 2025-10-30 16:16 1.8M
VaSP_1.22.0.tar.gz 2025-10-30 16:16 8.5M
VariantTools_1.51.0.tar.gz 2025-10-08 17:05 6.0M
VariantFiltering_1.46.0.tar.gz 2025-10-30 16:47 3.6M
VariantExperiment_1.24.0.tar.gz 2025-10-30 16:16 328K
VariantAnnotation_1.56.0.tar.gz 2025-10-30 16:47 2.0M
variancePartition_1.40.2.tar.gz 2026-03-20 16:15 4.7M
VarCon_1.18.0.tar.gz 2025-10-30 16:16 1.9M
VanillaICE_1.72.0.tar.gz 2025-10-30 16:16 2.1M
VAExprs_1.16.0.tar.gz 2025-10-30 16:16 562K
uSORT_1.36.0.tar.gz 2025-10-30 16:16 2.8M
UPDhmm_1.6.0.tar.gz 2025-10-30 16:16 1.1M
updateObject_1.14.0.tar.gz 2025-10-30 16:16 1.3M
universalmotif_1.28.0.tar.gz 2025-10-31 16:15 3.5M
Uniquorn_2.30.0.tar.gz 2025-10-30 16:16 2.2M
UniProt.ws_2.50.1.tar.gz 2026-02-09 17:15 242K
unifiedWMWqPCR_1.46.0.tar.gz 2025-10-30 16:16 504K
UNDO_1.52.0.tar.gz 2025-10-30 16:16 2.9M
uncoverappLib_1.20.0.tar.gz 2025-10-30 16:16 3.4M
UMI4Cats_1.20.0.tar.gz 2025-10-30 16:16 3.8M
Ularcirc_1.28.0.tar.gz 2025-10-30 16:16 5.2M
UCSC.utils_1.6.1.tar.gz 2025-12-15 17:15 232K
UCell_2.14.0.tar.gz 2025-10-30 16:47 2.3M
tximport_1.38.2.tar.gz 2025-12-25 17:15 311K
tximeta_1.28.3.tar.gz 2026-02-09 17:15 1.1M
txdbmaker_1.6.2.tar.gz 2025-12-15 17:15 1.0M
txcutr_1.16.0.tar.gz 2025-10-30 16:16 316K
twoddpcr_1.34.0.tar.gz 2025-10-30 16:16 3.8M
twilight_1.86.0.tar.gz 2025-10-30 16:16 1.2M
tweeDEseq_1.56.0.tar.gz 2025-10-30 16:16 236K
TVTB_1.36.0.tar.gz 2025-10-30 16:16 1.5M
TurboNorm_1.58.0.tar.gz 2025-10-30 16:16 2.0M
TTMap_1.32.0.tar.gz 2025-10-30 16:16 1.6M
ttgsea_1.18.0.tar.gz 2025-10-30 16:16 332K
TSCAN_1.48.0.tar.gz 2025-10-30 16:16 2.7M
TSAR_1.8.0.tar.gz 2025-10-30 16:16 3.9M
TRONCO_2.42.0.tar.gz 2025-10-30 16:16 4.2M
tRNAscanImport_1.30.0.tar.gz 2025-10-30 16:16 849K
tRNAdbImport_1.28.0.tar.gz 2025-10-30 16:16 323K
tRNA_1.28.0.tar.gz 2025-10-30 16:16 1.2M
tripr_1.16.0.tar.gz 2025-10-30 16:16 2.9M
triplex_1.50.0.tar.gz 2025-10-30 16:16 602K
trio_3.48.0.tar.gz 2025-10-30 16:16 756K
TrIdent_1.2.0.tar.gz 2025-10-30 16:16 1.6M
tricycle_1.18.0.tar.gz 2025-10-30 16:16 4.3M
TRESS_1.16.0.tar.gz 2025-10-30 16:16 487K
Trendy_1.32.0.tar.gz 2025-10-30 16:16 1.1M
TREG_1.14.0.tar.gz 2025-10-30 16:16 2.4M
TreeSummarizedExperiment_2.18.0.tar.gz 2025-10-31 16:15 1.1M
treekoR_1.18.0.tar.gz 2025-10-31 16:15 1.7M
treeio_1.34.0.tar.gz 2025-10-31 16:15 685K
treeclimbR_1.6.0.tar.gz 2025-10-31 16:15 682K
TreeAndLeaf_1.22.2.tar.gz 2026-02-21 17:15 4.9M
traseR_1.40.0.tar.gz 2025-10-30 16:16 6.2M
transomics2cytoscape_1.20.0.tar.gz 2025-10-30 16:16 12M
transmogR_1.6.0.tar.gz 2025-10-30 16:16 585K
tRanslatome_1.48.0.tar.gz 2025-10-30 16:16 938K
transite_1.28.0.tar.gz 2025-10-30 16:16 640K
transformGamPoi_1.16.0.tar.gz 2025-10-30 16:16 787K
transcriptR_1.38.3.tar.gz 2025-12-29 17:15 3.6M
transcriptogramer_1.32.0.tar.gz 2025-10-30 16:16 3.6M
TrajectoryUtils_1.18.0.tar.gz 2025-10-30 16:16 338K
TrajectoryGeometry_1.18.0.tar.gz 2025-10-30 16:16 1.9M
tradeSeq_1.24.0.tar.gz 2025-10-30 16:47 5.2M
trackViewer_1.46.0.tar.gz 2025-10-30 16:47 11M
tracktables_1.44.0.tar.gz 2025-10-30 16:16 357K
tpSVG_1.6.0.tar.gz 2025-10-30 16:16 1.2M
TPP_3.38.0.tar.gz 2025-10-30 16:16 8.4M
TPP2D_1.26.0.tar.gz 2025-10-30 16:16 2.3M
ToxicoGx_2.14.0.tar.gz 2025-10-30 16:16 3.9M
topGO_2.62.0.tar.gz 2025-10-30 16:16 2.4M
topdownr_1.32.0.tar.gz 2025-10-30 16:16 1.6M
topconfects_1.26.0.tar.gz 2025-10-30 16:16 3.6M
TOP_1.10.0.tar.gz 2025-10-30 16:16 491K
tomoseqr_1.14.0.tar.gz 2025-10-30 16:16 1.6M
tomoda_1.20.0.tar.gz 2025-10-30 16:16 2.9M
TOAST_1.24.0.tar.gz 2025-10-30 16:16 3.6M
TnT_1.32.0.tar.gz 2025-10-30 16:16 233K
TMSig_1.4.0.tar.gz 2025-10-30 16:16 3.9M
TMixClust_1.32.0.tar.gz 2025-10-30 16:16 510K
tLOH_1.18.0.tar.gz 2025-10-30 16:16 2.3M
tkWidgets_1.88.0.tar.gz 2025-10-30 16:16 479K
TissueEnrich_1.30.0.tar.gz 2025-10-30 16:16 3.7M
TIN_1.42.0.tar.gz 2025-10-30 16:16 4.6M
timescape_1.34.0.tar.gz 2025-10-30 16:16 674K
timeOmics_1.22.0.tar.gz 2025-10-30 16:16 4.0M
timecourse_1.82.0.tar.gz 2025-10-30 16:16 843K
tilingArray_1.88.0.tar.gz 2025-10-30 16:16 3.5M
TileDBArray_1.20.0.tar.gz 2025-10-30 16:16 306K
tigre_1.64.0.tar.gz 2025-10-30 16:16 320K
tidySummarizedExperiment_1.20.1.tar.gz 2025-11-11 17:15 396K
tidySpatialExperiment_1.6.2.tar.gz 2025-12-04 17:15 4.3M
tidySingleCellExperiment_1.20.1.tar.gz 2025-11-11 17:15 1.1M
tidysbml_1.4.0.tar.gz 2025-10-30 16:16 307K
tidyomics_1.6.0.tar.gz 2025-10-30 16:16 57K
tidyFlowCore_1.4.0.tar.gz 2025-10-30 16:16 787K
tidyCoverage_1.6.0.tar.gz 2025-10-30 16:16 3.7M
tidybulk_2.0.1.tar.gz 2025-11-14 17:15 4.7M
TFutils_1.30.0.tar.gz 2025-10-30 16:16 6.0M
TFHAZ_1.32.0.tar.gz 2025-10-30 16:16 2.5M
TFEA.ChIP_1.30.0.tar.gz 2025-10-30 16:16 6.8M
TFBSTools_1.48.0.tar.gz 2025-10-30 16:16 586K
TFARM_1.32.0.tar.gz 2025-10-30 16:16 473K
terraTCGAdata_1.14.0.tar.gz 2025-10-30 16:16 235K
ternarynet_1.54.0.tar.gz 2025-10-30 16:16 272K
terapadog_1.2.0.tar.gz 2025-10-30 16:16 1.5M
TEQC_4.32.0.tar.gz 2025-10-30 16:16 646K
tenXplore_1.32.0.tar.gz 2025-10-30 16:16 2.4M
TENxIO_1.12.1.tar.gz 2025-12-11 17:15 259K
TENET_1.2.0.tar.gz 2025-10-30 16:16 1.8M
TEKRABber_1.14.1.tar.gz 2026-01-19 17:15 3.4M
TDbasedUFEadv_1.10.0.tar.gz 2025-10-30 16:16 3.8M
TDbasedUFE_1.10.0.tar.gz 2025-10-30 16:16 1.3M
TCseq_1.34.0.tar.gz 2025-10-30 16:16 1.1M
TCGAutils_1.30.3.tar.gz 2026-03-28 16:15 407K
TCGAbiolinks_2.38.0.tar.gz 2025-10-31 16:15 64M
TCC_1.50.0.tar.gz 2025-10-30 16:16 3.2M
TBSignatureProfiler_1.22.0.tar.gz 2025-10-30 16:16 2.9M
TaxSEA_1.2.0.tar.gz 2025-10-30 16:16 351K
TargetSearch_2.12.0.tar.gz 2025-10-30 16:16 729K
TargetScore_1.48.0.tar.gz 2025-10-30 16:16 1.2M
TargetDecoy_1.16.0.tar.gz 2025-10-30 16:16 4.1M
target_1.24.0.tar.gz 2025-10-30 16:16 3.1M
TAPseq_1.22.1.tar.gz 2026-01-22 17:15 2.6M
tanggle_1.16.0.tar.gz 2025-10-31 16:15 2.1M
TADCompare_1.20.0.tar.gz 2025-10-30 16:16 4.2M
tadar_1.8.0.tar.gz 2025-10-30 16:16 1.7M
systemPipeTools_1.18.0.tar.gz 2025-10-31 16:15 1.0M
systemPipeShiny_1.20.0.tar.gz 2025-10-30 16:16 4.3M
systemPipeR_2.16.4.tar.gz 2026-03-07 17:15 7.7M
syntenet_1.12.0.tar.gz 2025-10-31 16:15 3.0M
SynMut_1.26.0.tar.gz 2025-10-30 16:16 106K
synlet_2.10.0.tar.gz 2025-10-30 16:16 1.5M
SynExtend_1.22.0.tar.gz 2025-10-30 16:16 3.1M
synergyfinder_3.18.0.tar.gz 2025-10-30 16:16 6.5M
synapsis_1.16.0.tar.gz 2025-10-30 16:16 3.4M
switchde_1.36.0.tar.gz 2025-10-30 16:16 1.0M
switchBox_1.46.0.tar.gz 2025-10-30 16:16 474K
swfdr_1.36.0.tar.gz 2025-10-30 16:16 1.2M
SwathXtend_2.32.0.tar.gz 2025-10-30 16:16 346M
SWATH2stats_1.40.1.tar.gz 2025-12-29 17:15 3.0M
SVP_1.2.1.tar.gz 2025-11-04 17:15 4.2M
SVMDO_1.10.0.tar.gz 2025-10-30 16:15 2.4M
svaRetro_1.16.6.tar.gz 2026-02-19 17:15 1.6M
svaNUMT_1.16.0.tar.gz 2025-10-30 16:15 815K
sva_3.58.0.tar.gz 2025-10-30 16:15 444K
survtype_1.26.0.tar.gz 2025-10-30 16:15 347K
survcomp_1.60.1.tar.gz 2026-02-21 17:15 642K
survClust_1.4.0.tar.gz 2025-10-30 16:15 814K
SurfR_1.6.0.tar.gz 2025-10-30 16:15 374K
surfaltr_1.16.0.tar.gz 2025-10-30 16:15 3.1M
supersigs_1.18.0.tar.gz 2025-10-30 16:15 2.6M
SuperCellCyto_1.0.0.tar.gz 2025-10-30 16:15 4.4M
Summix_2.16.0.tar.gz 2025-10-30 16:15 1.3M
SummarizedExperiment_1.40.0.tar.gz 2025-10-30 16:15 675K
SUITOR_1.12.0.tar.gz 2025-10-30 16:15 265K
subSeq_1.40.0.tar.gz 2025-10-30 16:15 2.9M
SubCellBarCode_1.26.0.tar.gz 2025-10-30 16:15 2.3M
StructuralVariantAnnotation_1.26.0.tar.gz 2025-10-30 16:15 1.0M
structToolbox_1.22.0.tar.gz 2025-12-25 17:15 4.8M
Structstrings_1.26.0.tar.gz 2025-10-30 16:15 376K
struct_1.22.1.tar.gz 2025-12-25 17:15 602K
STRINGdb_2.22.0.tar.gz 2025-10-30 16:15 10M
Streamer_1.56.0.tar.gz 2025-10-30 16:15 136K
strandCheckR_1.28.0.tar.gz 2025-10-30 16:15 1.2M
stPipe_1.0.1.tar.gz 2025-12-01 17:15 5.8M
stJoincount_1.12.0.tar.gz 2025-10-30 16:15 2.7M
stepNorm_1.82.0.tar.gz 2025-10-30 16:15 461K
statTarget_1.40.0.tar.gz 2025-10-30 16:15 781K
Statial_1.12.0.tar.gz 2025-10-30 16:15 9.2M
STATegRa_1.46.0.tar.gz 2025-10-30 16:15 4.9M
standR_1.14.0.tar.gz 2025-10-30 16:15 2.4M
stageR_1.32.0.tar.gz 2025-10-30 16:15 781K
STADyUM_1.0.2.tar.gz 2025-12-08 17:15 2.8M
StabMap_1.4.0.tar.gz 2025-10-30 16:15 1.9M
ssviz_1.44.0.tar.gz 2025-10-30 16:15 1.2M
ssrch_1.26.0.tar.gz 2025-10-30 16:15 1.4M
ssPATHS_1.24.0.tar.gz 2025-10-30 16:15 3.7M
sSNAPPY_1.14.0.tar.gz 2025-10-30 16:15 4.0M
ssize_1.84.0.tar.gz 2025-10-30 16:15 546K
sSeq_1.48.0.tar.gz 2025-10-30 16:15 4.2M
sscu_2.40.0.tar.gz 2025-10-30 16:15 1.3M
srnadiff_1.30.0.tar.gz 2025-10-30 16:15 2.4M
SRAdb_1.72.0.tar.gz 2025-10-30 16:15 891K
sRACIPE_2.2.0.tar.gz 2025-10-30 16:15 2.0M
squallms_1.4.0.tar.gz 2025-10-30 16:15 2.2M
SPsimSeq_1.20.0.tar.gz 2025-10-30 16:15 769K
spqn_1.22.0.tar.gz 2025-10-30 16:15 2.9M
SpotSweeper_1.6.0.tar.gz 2025-10-30 16:15 3.4M
SPOTlight_1.14.0.tar.gz 2025-10-30 16:15 4.1M
SpotClean_1.12.1.tar.gz 2026-02-09 17:15 4.0M
spoon_1.6.0.tar.gz 2025-10-31 16:15 462K
SPONGE_1.32.0.tar.gz 2025-10-30 16:15 9.0M
splots_1.76.0.tar.gz 2025-10-30 16:15 670K
SPLINTER_1.36.0.tar.gz 2025-10-30 16:15 964K
splineTimeR_1.38.0.tar.gz 2025-10-30 16:15 1.2M
SplineDV_1.2.0.tar.gz 2025-10-31 16:15 2.4M
SplicingGraphs_1.50.1.tar.gz 2025-11-03 17:15 4.5M
SplicingFactory_1.18.0.tar.gz 2025-10-30 16:15 756K
SpliceWiz_1.12.0.tar.gz 2025-10-31 16:15 4.8M
splatter_1.34.0.tar.gz 2025-10-30 16:15 6.5M
spkTools_1.66.0.tar.gz 2025-10-30 16:15 666K
spillR_1.6.0.tar.gz 2025-10-30 16:15 429K
spiky_1.16.0.tar.gz 2025-10-30 16:15 14M
spikeLI_2.70.0.tar.gz 2025-10-30 16:15 395K
spicyR_1.22.0.tar.gz 2025-10-30 16:15 3.1M
SPICEY_1.0.0.tar.gz 2025-10-30 16:15 1.0M
SPIAT_1.12.1.tar.gz 2026-02-05 17:15 7.4M
SPIA_2.62.0.tar.gz 2025-10-30 16:15 2.5M
SPEM_1.50.0.tar.gz 2025-10-30 16:15 602K
SpectriPy_1.0.1.tar.gz 2026-03-05 17:15 1.0M
SpectraQL_1.4.0.tar.gz 2025-10-30 16:15 515K
SpectralTAD_1.26.0.tar.gz 2025-10-30 16:15 1.5M
Spectra_1.20.1.tar.gz 2025-12-29 17:15 1.8M
SpeCond_1.64.0.tar.gz 2025-10-30 16:15 1.7M
specL_1.44.0.tar.gz 2025-10-30 16:15 2.1M
speckle_1.10.0.tar.gz 2025-10-30 16:15 1.4M
spatialSimGP_1.4.0.tar.gz 2025-10-30 16:15 696K
SpatialOmicsOverlay_1.10.0.tar.gz 2025-10-30 16:15 4.4M
spatialHeatmap_2.16.3.tar.gz 2026-01-26 17:15 34M
SpatialFeatureExperiment_1.12.1.tar.gz 2025-11-05 17:58 1.8M
spatialFDA_1.2.1.tar.gz 2026-03-26 16:15 6.1M
SpatialExperimentIO_1.2.0.tar.gz 2025-10-30 16:15 610K
SpatialExperiment_1.20.0.tar.gz 2025-10-30 16:15 5.2M
SpatialDecon_1.20.1.tar.gz 2026-02-12 17:15 5.1M
spatialDE_1.16.0.tar.gz 2025-10-30 16:15 3.7M
SpatialCPie_1.26.0.tar.gz 2025-10-30 16:15 1.0M
spaSim_1.12.0.tar.gz 2025-10-30 16:15 3.6M
SparseSignatures_2.20.0.tar.gz 2025-10-30 16:15 1.5M
sparsenetgls_1.28.0.tar.gz 2025-10-30 16:15 603K
sparseMatrixStats_1.22.0.tar.gz 2025-10-30 16:15 690K
SparseArray_1.10.10.tar.gz 2026-03-31 16:15 468K
sparrow_1.16.0.tar.gz 2025-10-30 16:15 4.1M
spARI_1.0.0.tar.gz 2025-10-30 16:15 301K
SpaNorm_1.4.0.tar.gz 2025-10-30 16:15 8.1M
Spaniel_1.24.0.tar.gz 2025-10-30 16:15 3.9M
spacexr_1.2.0.tar.gz 2025-10-30 16:15 433K
SpaceTrooper_1.0.1.tar.gz 2025-12-18 17:15 4.5M
SpaceMarkers_2.0.0.tar.gz 2025-10-30 16:15 3.1M
sosta_1.2.0.tar.gz 2025-10-30 16:15 5.9M
SOMNiBUS_1.18.0.tar.gz 2025-10-30 16:15 1.1M
SomaticSignatures_2.46.0.tar.gz 2025-10-30 16:15 2.2M
snpStats_1.60.0.tar.gz 2025-10-30 16:15 7.7M
SNPRelate_1.44.0.tar.gz 2025-10-30 16:15 3.3M
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