5c79ef3ea41b616e038b4eb30d719458 *DESCRIPTION
783b7e40cdfb4a1344d15b1f7081af66 *LICENSE
53994c119ec01e42ac8b44b427016f6f *NAMESPACE
f2c5b32c086e917ed60ee3c4c50f30a5 *NEWS.md
6ffc112b77dae1eecd382538f580abfa *R/class_definitions.R
539933be081322a45efb8303ae8c590a *R/convenience_fxns.R
74d9faafea550a24f6d40e0ab47c3041 *R/data.R
df0772e97ebe4b19c3de461e908ecec9 *R/differential_fxns.R
0769516503a22199b35ed23729570ea6 *R/import_fxns.R
5f9c1b4be0ddbe4616c10cb888da0dad *R/plot_fxns.R
7581465ec66820bd008d203d7b3b4434 *R/processing_fxns.R
046b8dfc6edcbbdea888b5d42d5bfedb *R/sysdata.rda
e0c35b5b51482a53e76c02c768211a34 *R/utils.R
de0e006077ed74f2059eac5848b55fc6 *README.md
b68430950da8ba544f386531fefdefa4 *build/vignette.rds
27150518ba128013fb94b4a83b0cd491 *data/CellPhoneDB.RData
6fe342a4cb1aed9758fa29a0dd451fd1 *data/PBMC.RData
bcb96f47a76e5e5cd213f10c4878c208 *data/SCENIC.RData
a1682ed206ab13cd439d0548ca863ed1 *inst/CITATION
3c09968318faed0ade18d13600b2b487 *inst/doc/dominoSignal.R
314048cf354ec41e6d56bb4db7ff4311 *inst/doc/dominoSignal.Rmd
06f2a68dcfff35114bf6890f64ae69a5 *inst/doc/dominoSignal.html
210f4eb98c292d5d408325601fda242d *inst/doc/domino_object_vignette.R
72d3acf0860b8ad5f8eb1fb0c47418c1 *inst/doc/domino_object_vignette.Rmd
8fd5bd176be0b2abf881ebc6db2a80f3 *inst/doc/domino_object_vignette.html
90c5b063ea3673a033d0caf130d50d1e *inst/doc/plotting_vignette.R
7868b2c9989fff6980780ba372763b27 *inst/doc/plotting_vignette.Rmd
0063a1ad7b0861ea4783ffa967babb63 *inst/doc/plotting_vignette.html
d294309e20c55857c1e6ae47fac637f6 *man/CellPhoneDB.Rd
05ad12c1d2354ace279ea23a3ff9bdf4 *man/PBMC.Rd
9b7fe9c72e3157cbcfc37ec10953f008 *man/SCENIC.Rd
052dec2f9997035b50fd89eb09dde1cc *man/add_rl_column.Rd
393c704605ed2e67c2580a2b381156ff *man/avg_exp_for_complexes.Rd
9073ef83503a375af88722a56ef30fd3 *man/build_domino.Rd
a83873bfaa7331d17a40729d8dda1d5d *man/check_arg.Rd
3fea6b09101a53d6f4bf7ef6afc82ec7 *man/circos_ligand_receptor.Rd
fb041fb59b994ced1c524fcb4c0a1c25 *man/conv_py_bools.Rd
6d0d5ca6296a26ecd58aa8e243f5ae79 *man/convert_genes.Rd
4fee89f051d2fda733ed3fa9f13058c8 *man/cor_heatmap.Rd
8144539f271aafad6e8e2c1624e3d48e *man/cor_scatter.Rd
a4666e867b2c04811d2e2c6950588878 *man/count_linkage.Rd
fa2640ac1cb037b492b8d91b834ea76b *man/create_domino.Rd
f6a52a3d9102781f0438d7ebbe00f306 *man/create_regulon_list_scenic.Rd
08732b42dbb7eca62a23b46a26ad4460 *man/create_rl_map_cellphonedb.Rd
c86686305fd840a295f6f6341667b590 *man/do_norm.Rd
c333fb64af798fd1ee63797159c6f7ae *man/dom_clusters.Rd
98950090bb826fc21c9c862afdaeb122 *man/dom_correlations.Rd
efe29484de23e950d0cce8e4f5425251 *man/dom_counts.Rd
174b459e198f48a26b6318cf453f1d44 *man/dom_database.Rd
bc0bb0d231520f6fed57cec22a32c02d *man/dom_de.Rd
5cb4fc519c9106620309202a8d88faaa *man/dom_info.Rd
a5e0724c22964cfdab3254d83ac41bd4 *man/dom_linkages.Rd
c379af94c440c0231b78bfb293df99b5 *man/dom_network_items.Rd
dab7d5c26f69adf505218de71167c947 *man/dom_signaling.Rd
b0d8060e402ad0d09cac34b72f1df02f *man/dom_tf_activation.Rd
be3a05908f616717faac7faf8f5abdf5 *man/dom_zscores.Rd
1317856beada78dc36192982ab63622b *man/domino-class.Rd
f0627ef6b5ad94396c1cefd105a26ee1 *man/feat_heatmap.Rd
de7ee486ecea3efe8ed2b7271fef62e7 *man/figures/logo.svg
e5becf5725d15a4416172a65ffba64db *man/gene_network.Rd
87a56758a654e70d8319dc8c768715b1 *man/ggplot_col_gen.Rd
071967601d1f4ecac97e0bf63fe1030f *man/incoming_signaling_heatmap.Rd
d60c8074965c5ddc05a74bac95704cca *man/lc.Rd
698250d94d24be3df9207db7f1e8cc68 *man/linkage_summary-class.Rd
5d1d68c8a4f0e633eca8beb52d43625d *man/mean_exp_by_cluster.Rd
a8b829d6b4754d74b42349f4e9dd1648 *man/mean_ligand_expression.Rd
6c2144924a42ac0bfb31712568ad45bb *man/mock_linkage_summary.Rd
b9192a04668247332f224883efe3640c *man/obtain_circos_expression.Rd
450f6c7c3cf0d3b657517a2d4dec1ccf *man/plot_differential_linkages.Rd
f7c1fc0c3585a3831add850653f51115 *man/print-domino-method.Rd
583558a4bad95cd99dcd918c2c5388d1 *man/print-linkage_summary-method.Rd
c9928dabf3adfe9e0a66da45e10726cb *man/read_if_char.Rd
00ca2243fb5b45c41f9e325c6e111e1c *man/rename_clusters.Rd
1583d13ff81e890d4dca0be6b8ffb014 *man/render_circos_ligand_receptor.Rd
f9b0dbab03ea39ecbcfb53b32153ed67 *man/resolve_complexes.Rd
57b9aa5f8387862fdc23dada9d5cb8e0 *man/resolve_names.Rd
d148feb54360adeb3e1432a3567e7325 *man/roxygen/meta.R
876f84666afa333c7eda83b5ba92c8bf *man/show-domino-method.Rd
ec9ae8a9a8344d6fef04c8b5a81e0a0e *man/show-linkage_summary-method.Rd
6baaa9f65f944fe292d26c55ae6c2082 *man/signaling_heatmap.Rd
6f01fe7baf7e5fb02d04072aca66c904 *man/signaling_network.Rd
4cfcdfba812e9656519a4bc75ac27606 *man/summarize_linkages.Rd
c819918de74739a6b76a68d52ad6a13e *man/table_convert_genes.Rd
9cfd93f9653556a0ebc21a93e6d18379 *man/test_differential_linkages.Rd
4b05d7e20f1e3f83944aee2a0d93d71b *tests/testthat.R
a4cab9890927c1fee2272d76d99aefda *tests/testthat/test-circos.R
d2bc41a9a1ba0f293062786b0bee6019 *tests/testthat/test-convenience_fxns.R
13a41b9c0ef8cd08f61826069ab30b72 *tests/testthat/test-import_fxns.R
d80b4db19e4747b02ddb381c7adf0f52 *tests/testthat/test-regression.R
1e902f2afba562b6baf7c6adaa7aa304 *tests/testthat/test-utils.R
314048cf354ec41e6d56bb4db7ff4311 *vignettes/dominoSignal.Rmd
72d3acf0860b8ad5f8eb1fb0c47418c1 *vignettes/domino_object_vignette.Rmd
7868b2c9989fff6980780ba372763b27 *vignettes/plotting_vignette.Rmd
