1583a4fd545f1d47f4c4070beaa663cf *DESCRIPTION
1e8f6e0df0dcf6cedfd38b96fd0480b2 *LICENSE
259f988f09937cf2cbf8b3e6941d230e *NAMESPACE
d59cfa88afbb8ca8eabfac3563886f5f *NEWS.md
5df66bbed5b97c38b5409a25274f1430 *R/aggregateCodPot.R
e815b8cf8a87d37c8c00df2b8a799440 *R/annotateInteractions.R
5d6bced7539982654cd073a22f0c0460 *R/bestTool.R
41fa8337ab5269b602d0b094b2a8e93d *R/bestToolAtleast.R
4a4ea5272d77c949cb9020c592102b5f *R/bestToolCombination.R
b8430a579f71fcf5eb84fb6b292ea149 *R/calculateCm.R
d6101f972544b80a3b2d0f602cb49b8e *R/createTrainTestSets.R
584d6e81be482fe0b20c967180fbf8c6 *R/evaluateToolCombinations.R
eb5cb1afe0604276cf98cb1534594494 *R/evaluateToolsThresholds.R
68a0ed567e9d117b43779b2f20857914 *R/findCisInteractions.R
922534391776418dd722fd2f50c4ab68 *R/findTransInteractions.R
219ca3a30de6deec81d0ea73fd42ed07 *R/getBiotypes.R
683ce5a95d6a9059c2ec36503970f72e *R/getGtfStats.R
df6cc46bc7fae1a55b713f3d5065b35a *R/lncRna-package.R
742afc57f0737509a1c2d73b134cf27f *R/plotClockMetrics.R
6e3e18e33ef6eec485282306c3454e2d *R/plotRadarMetrics.R
115758e0f486ab010f1933f3b7c9be1c *R/plotSankeyInteractions.R
2b6ee428fa4cc707d9983605ac264de6 *R/prepareEvaluationSets.R
33cb1247dddfd1c98721a86839a8db90 *R/utils.R
39983fc3462d619728eb3e59888b0530 *README.md
7af92341368dd230665898e91397b18e *build/vignette.rds
318d395819aec816dba3240d843a2262 *inst/doc/lncRna.R
dd722ce8869d3e46990c05b9f12c1b96 *inst/doc/lncRna.Rmd
06688c6c4dfa6e210375cc70539da0a4 *inst/doc/lncRna.html
e59fdf17a243190fe95d84b030ebcb8c *inst/img/lncRna_logo.png
767d2c5cefd49f294e19d76adf759fcc *inst/img/lncRna_logo_small.png
696ee3e745bb13493bb805f01bc5d21a *inst/img/vennFull.png
fca15ce5e8a84d14c150df617453efde *inst/img/vennSel.png
ff12b2aab621d094d048de7bbcd214f5 *inst/img/venn_4.png
8e784248388563f1ea19abae11da5c68 *inst/img/venn_all.png
47f03079c42d1f1f75bad718ab355c39 *man/aggregateCodPot.Rd
7f8dec65b0c9d3f375fb7be7bfae6e16 *man/annotateInteractions.Rd
ee9a76fee1e069ec4f23bf0e729be57c *man/bestTool.Rd
f2dc52790b7f83a9c8bf04322509ebb0 *man/bestToolAtleast.Rd
bc64751e15380c2455a894063529aa16 *man/bestToolCombination.Rd
e8287ae9e342e7295b2229cb0eb04cfd *man/calculateCM.Rd
29e2f17f9525b6f61a82ffc9b070fd86 *man/createTrainTestSets.Rd
a0d57ebce3352355e4302a48ba048764 *man/evaluateToolCombinations.Rd
dde3fa3d237db85f4e9d170dd0a0cd9a *man/evaluateToolsThresholds.Rd
534eec7466e4c81267739c1cf7e67be1 *man/findCisInteractions.Rd
d540b8e0f6eb23be36e840d45b0817c5 *man/findTransInteractions.Rd
2b3d442369fdbc9c7ab76525b33ed152 *man/getBiotypes.Rd
ff2df34e0e41622fa30fdae5b0128ecf *man/getGtfStats.Rd
44e7e44b9d66090e9a1f9a3058d725f2 *man/lncRna-package.Rd
1ab9402cda80797f6a858d1f37ccba48 *man/plotClockMetrics.Rd
b7b42bcc18a23100f3aafdc4400997e5 *man/plotRadarMetrics.Rd
97dd8da5307255af46e0780c066bfc1c *man/plotSankeyInteractions.Rd
52dccb6ac28d114c4e246ea7facf65b7 *man/plotVennCodPot.Rd
832cb2e378a2a7038f9004e407bba053 *man/prepareEvaluationSets.Rd
b506cd565aac275870dd5185a8604f26 *tests/testthat.R
0954776e3c4f5bc62f2cdd8374072ae1 *tests/testthat/test-aggregateCodPot.R
66a5b7dc2e7464b0b7ed1df357a82d0f *tests/testthat/test-createTrainTestSets.R
9a1b3d0c26bacf087a4bd001e1226e88 *tests/testthat/test-evaluation.R
ca6f6dff4d3027f44ee6e31cae76d126 *tests/testthat/test-gtf_processing.R
0a0755771ddc81a6f4e1c9cad07ff524 *tests/testthat/test-interactions.R
0bd64e95aebaab703cb29fe4906be049 *tests/testthat/test-plotClockMetrics.R
f8ef50847eb5b8aba7f00b0033a51078 *tests/testthat/test-plotRadarMetrics.R
9a2b48ad80dbf593c6bd614635eb25da *tests/testthat/test-plotSankeyInteractions.R
dd722ce8869d3e46990c05b9f12c1b96 *vignettes/lncRna.Rmd
