# Analysis of Big Data from aCGH Experiments using Parallel Computing and ff Objects

## Documentation for package ‘ADaCGH2’ version 2.51.1

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS

## Help Pages

cutFile | Cut a file and return individual columns
inputEx | A fictitious aCGH data set
inputEx-sp | A fictitious aCGH data set
inputEx.nona | A fictitious aCGH data set
inputToADaCGH | Convert CGH data to ff or RAM objects for use with ADaCGH2
outputToCGHregions | ADaCGH2 output as input to CGHregions
pChromPlot | Segment plots for aCGH as PNG
pSegment | Parallelized/"unified" versions of several aCGH segementation algorithms/methods
pSegmentCGHseg | Parallelized/"unified" versions of several aCGH segementation algorithms/methods
pSegmentDNAcopy | Parallelized/"unified" versions of several aCGH segementation algorithms/methods
pSegmentGLAD | Parallelized/"unified" versions of several aCGH segementation algorithms/methods
pSegmentHaarSeg | Parallelized/"unified" versions of several aCGH segementation algorithms/methods
pSegmentHMM | Parallelized/"unified" versions of several aCGH segementation algorithms/methods
pSegmentWavelets | Parallelized/"unified" versions of several aCGH segementation algorithms/methods