Package: LRDE
Type: Package
Title: Differential Expression Analysis with Long Read RNA-Seq Data
Version: 0.99.6
Authors@R: 
    c(
    person(given = "Ziyang", family = "Liu", email = "jacobleo773@gmail.com",
           role = c("aut", "cre"),
           comment = c(ORCID = "0009-0004-2098-434X")),
    person(given = "Hongxu", family = "Ding", email = "hongxuding@arizona.edu", role = c("aut", "fnd"))
    )
Description: Provides hurdle negative binomial models for differential
        expression analysis with long-read RNA-Seq data.
Depends: R (>= 4.4.0)
Imports: stats, SummarizedExperiment
Suggests: BiocStyle, knitr, rmarkdown, BiocGenerics, testthat (>=
        3.0.0)
biocViews: Software, DifferentialExpression, Sequencing, RNASeq,
        LongRead, GeneExpression, Regression
URL: https://github.com/ziyang773/LRDE
BugReports: https://github.com/ziyang773/LRDE/issues
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.3
VignetteBuilder: knitr
Config/testthat/edition: 3
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-08 03:55:08 UTC
RemoteUrl: https://github.com/bioc/LRDE
RemoteRef: HEAD
RemoteSha: 449980e0deedafe9365599a6aceda35f61589046
NeedsCompilation: no
Packaged: 2026-04-12 06:28:18 UTC; root
Author: Ziyang Liu [aut, cre] (ORCID: <https://orcid.org/0009-0004-2098-434X>),
  Hongxu Ding [aut, fnd]
Maintainer: Ziyang Liu <jacobleo773@gmail.com>
Built: R 4.6.0; ; 2026-04-12 06:30:12 UTC; unix
