Package: MSPrep
Title: Package for Summarizing, Filtering, Imputing, and Normalizing
        Metabolomics Data
Version: 1.20.1
Authors@R: 
  c(person("Max", "McGrath",
           email = "max.mcgrath@ucdenver.edu",
           role = c("aut", "cre")),
    person("Matt", "Mulvahill",
           email = "matt.mulvahill@gmail.com",
           role = c("aut")),
    person("Grant", "Hughes",
           email = "",
           role = c("aut")),
    person("Sean", "Jacobson", 
           email = "jacobsonseanr@gmail.com",
           role = c("aut")),
    person("Harrison", "Pielke-lombardo",
           email = "harrison.pielke-lombardo@cuanschutz.edu",
           role = c("aut")),
    person("Katerina", "Kechris",
           email = "Katerina.Kechris@cuanschutz.edu",
           role = c("aut", "cph", "ths")))
Description: Package performs summarization of replicates, filtering by
        frequency, several different options for imputing missing data,
        and a variety of options for transforming, batch correcting,
        and normalizing data.
URL: https://github.com/KechrisLab/MSPrep
BugReports: https://github.com/KechrisLab/MSPrep/issues
Depends: R (>= 4.1.0)
Imports: SummarizedExperiment, S4Vectors, pcaMethods (>= 1.24.0), crmn,
        preprocessCore, dplyr (>= 0.7), tidyr, tibble (>= 1.2),
        magrittr, rlang, stats, stringr, methods, missForest, sva, VIM,
Suggests: BiocStyle, knitr, rmarkdown, testthat (>= 1.0.2)
VignetteBuilder: knitr
LazyData: false
NeedsCompilation: no
License: GPL-3
biocViews: Metabolomics, MassSpectrometry, Preprocessing
Encoding: UTF-8
RoxygenNote: 7.1.2
Config/pak/sysreqs: cmake make libicu-dev libpng-dev libxml2-dev
        libssl-dev xz-utils zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2026-01-17 16:51:20 UTC
RemoteUrl: https://github.com/bioc/MSPrep
RemoteRef: RELEASE_3_22
RemoteSha: 0d9b2b2b5994eebb20ea54bbc0f397aa47bebc02
Packaged: 2026-01-18 03:52:03 UTC; root
Author: Max McGrath [aut, cre],
  Matt Mulvahill [aut],
  Grant Hughes [aut],
  Sean Jacobson [aut],
  Harrison Pielke-lombardo [aut],
  Katerina Kechris [aut, cph, ths]
Maintainer: Max McGrath <max.mcgrath@ucdenver.edu>
Built: R 4.5.2; ; 2026-01-18 03:54:16 UTC; windows
