Package: roar
Type: Package
Title: Identify differential APA usage from RNA-seq alignments
Version: 1.46.0
Date: 2016-03-21
Author: Elena Grassi
Maintainer: Elena Grassi <grassi.e@gmail.com>
Description: Identify preferential usage of APA sites, comparing two
        biological conditions, starting from known alternative sites
        and alignments obtained from standard RNA-seq experiments.
biocViews: Sequencing, HighThroughputSequencing, RNAseq, Transcription
License: GPL-3
Depends: R (>= 3.0.1)
Imports: methods, BiocGenerics, S4Vectors, IRanges, GenomicRanges,
        SummarizedExperiment, GenomicAlignments (>= 0.99.4),
        rtracklayer, GenomeInfoDb
Suggests: RNAseqData.HNRNPC.bam.chr14, testthat
URL: https://github.com/vodkatad/roar/
Config/pak/sysreqs: make libbz2-dev liblzma-dev libxml2-dev libssl-dev
        xz-utils zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2025-10-29 14:17:36 UTC
RemoteUrl: https://github.com/bioc/roar
RemoteRef: RELEASE_3_22
RemoteSha: bb817909dbc87238c5da4ab2e7f70ca425fef1c4
NeedsCompilation: no
Packaged: 2026-03-01 09:31:22 UTC; root
Built: R 4.5.2; ; 2026-03-01 09:33:36 UTC; windows
