# Generated by roxygen2: do not edit by hand

S3method(lines,SlingshotDataSet)
S3method(pairs,SlingshotDataSet)
S3method(plot,SlingshotDataSet)
export(SlingshotDataSet)
export(as.PseudotimeOrdering)
export(as.SlingshotDataSet)
export(embedCurves)
export(getCurves)
export(getLineages)
export(newSlingshotDataSet)
export(plot3d.SlingshotDataSet)
export(slingAvgPseudotime)
export(slingBranchGraph)
export(slingBranchID)
export(slingClusterLabels)
export(slingCurveWeights)
export(slingCurves)
export(slingLineages)
export(slingMST)
export(slingParams)
export(slingPseudotime)
export(slingReducedDim)
export(slingshot)
exportClasses(SlingshotDataSet)
exportMethods(SlingshotDataSet)
exportMethods(as.PseudotimeOrdering)
exportMethods(as.SlingshotDataSet)
exportMethods(embedCurves)
exportMethods(getCurves)
exportMethods(getLineages)
exportMethods(newSlingshotDataSet)
exportMethods(predict)
exportMethods(reducedDim)
exportMethods(reducedDims)
exportMethods(show)
exportMethods(slingAvgPseudotime)
exportMethods(slingBranchGraph)
exportMethods(slingBranchID)
exportMethods(slingClusterLabels)
exportMethods(slingCurveWeights)
exportMethods(slingCurves)
exportMethods(slingLineages)
exportMethods(slingMST)
exportMethods(slingParams)
exportMethods(slingPseudotime)
exportMethods(slingReducedDim)
exportMethods(slingshot)
import(TrajectoryUtils)
import(graphics)
import(matrixStats)
import(methods)
import(princurve)
import(stats)
importClassesFrom(SingleCellExperiment,SingleCellExperiment)
importFrom(S4Vectors,"metadata<-")
importFrom(S4Vectors,metadata)
importFrom(SingleCellExperiment,"reducedDims<-")
importFrom(SingleCellExperiment,colData)
importFrom(SingleCellExperiment,reducedDim)
importFrom(SingleCellExperiment,reducedDims)
importFrom(SummarizedExperiment,"assay<-")
importFrom(SummarizedExperiment,"colData<-")
importFrom(SummarizedExperiment,assay)
importFrom(grDevices,dev.flush)
importFrom(grDevices,dev.hold)
importFrom(graphics,lines)
importFrom(igraph,V)
importFrom(princurve,project_to_curve)
